DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rib and LOC3290035

DIOPT Version :10

Sequence 1:NP_001261085.1 Gene:rib / 44855 FlyBaseID:FBgn0003254 Length:680 Species:Drosophila melanogaster
Sequence 2:XP_061499492.1 Gene:LOC3290035 / 3290035 VectorBaseID:AGAMI1_008331 Length:876 Species:Anopheles gambiae


Alignment Length:194 Identity:50/194 - (25%)
Similarity:88/194 - (45%) Gaps:18/194 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PTAPVASSGEVGQTYCLRWNNHQTNLVQILHALHEVGSYVDCSLVVDDE----QFQAHRVVLAAN 64
            |.:|.:.|.:..|.:....:.....:...|..|:....|.|..|:..::    ...|||:|||..
Mosquito   262 PVSPSSKSPQHSQVFHFNGSYRHAAMESFLSQLYSNQLYADVMLITCNDGVTCVMPAHRMVLANF 326

  Fly    65 SPYFQHILKDV-PQDHCS----IILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVK 124
            |.:|..||..: |..:.|    ::.|.:....:..|||:||||:.:||:....:.||....|:|:
Mosquito   327 SEFFSSILGALKPNTNGSPLTVLLQPDISQPVMQLLLQFMYTGKVSVTQELIGDFLRCGHVLRVR 391

  Fly   125 GLYDNLMKFNHASVTPTSSSGAGGAKPQNGSASNHSSSVI-----STSTHISPSAAISSSCSPP 183
            |::....:.:.....|..::   .:|.|..|.|:...|.:     ||.|.: |.|:.:|:.|.|
Mosquito   392 GVWSEEKEGSSDVERPVRTA---PSKRQPASHSDSEGSAVDEFDRSTVTSV-PQASAASNASEP 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ribNP_001261085.1 BTB_POZ_BAB-like 42..125 CDD:349624 29/91 (32%)
HTH_psq 373..417 CDD:283007
LOC3290035XP_061499492.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.