Protein Alignment rib and CG12236

DIOPT Version :9

• Sequence 1: NP_001261085.1
• Gene: rib / 44855
• FlyBaseID: FBgn0003254
• Length: 680
• Species: Drosophila melanogaster
• Sequence 2: NP_727050.1
• Gene: CG12236 / 31523
• FlyBaseID: FBgn0029822
• Length: 553
• Species: Drosophila melanogaster
• Alignment Length: 602
• Identity: 125/602 - (20%)
• Similarity: 210/602 - (34%)
• Gaps: 145/602 - (24%)

  Fly    16 QTYCLRWNNHQTNLVQIL--HALHEVGSYVDCSLVVDDEQFQAHRVVLAANSPYFQHILKDVPQD 78
            |.|.|||||:..:|...|  |.|::  .:||.||.||..:.:||:|||::.|.||:.|.|:.|..
  Fly     5 QQYSLRWNNYLRHLTYSLDNHRLND--DFVDVSLCVDGRRIKAHKVVLSSCSSYFKEIFKENPHP 67

  Fly    79 HCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHASVTP--- 140
            |..||...:|..::.:::::||.||..|.:......|:||:.|.|:||.....:.....|.|
  Fly    68 HPVIIFKFIKFEDLNSIIEFMYQGEVNVQQEALQSFLQTAELLAVQGLTAEEKEKPQIPVAPLIS 132

  Fly   141 ------TSSSGAGGAKPQNGSASNHSSSVISTSTHISPSAAISSSCSPPPPPQFGYQPGYSHYPQ 199
                  |..|.......|....||.:.:..:|.|...|:|.:
  Fly   133 EHKLIKTIPSTIRAVNEQQQQVSNVAQAQTATQTIEIPAATL----------------------- 174

  Fly   200 QQPMSASQIPAGEAPLTPTQATPHSAASGAGEAGGQWPLTPSAAAAMLNSVYESAADMNPLKRKK 264
            .|..:|||:        |:|....:||               ||||....|.......:.::..:
  Fly   175 LQATNASQV--------PSQVVAAAAA---------------AAAAQQLQVQHQQQQHHHVQTTQ 216

  Fly   265 LSAISSMLLSGNRDTPILRNVLAQANPADSSQPGPMNANGEKTPTHPHQNT-----QLPAGLGVS 324
            :..|........:.....:....|.......|....:...:.||......|     .|||...|.
  Fly   217 IQHIQVQSAPPPQQQQQQQQQQQQQQQQQQQQQQQQSQQQQTTPVQTQHLTITNAVALPAASSVK 281

  Fly   325 GGERNHSFNGSDYGGDKEPLSPYTDRSFEEETGQSGGKKPEWKRYKQYTRADMMCAIQAVREGMS 389
              :|..:|:..|            |..:..||             ..|...|....::...  |:
  Fly   282 --KRKITFSDDD------------DNMYTTET-------------VDYAVKDEQTIVKTAE--MT 317

  Fly   390 ALQASRKYGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGAESSQGFSYSAAAAAAAHNYGHGHG 454
            .|:.:.|..:|           :...|....|....:.|  ::||..:.:||...|.::..:...
  Fly   318 FLRGAVKMDIP-----------DYIVGEVDDRLSDGATP--QTSQDATTAAAQNVAQYSSEYEIL 369

  Fly   455 HHSEVKRDQKVDHVPAHHGMPPTIPPSAAALLDHAFLQQALENRGGDMA---------------- 503
            ..||::...:.|...|...:..|.....|:....|...|.:|:.||..|
  Fly   370 TESEMEEKYQADADNAEIAIEMTRLLGTASGTPGAGSGQVMEDSGGGSATTGPSTTVSVTQVKSD 434

  Fly   504 ----GREAL---HAMALAAAAHAAANRLSSSPAEMDQRS-------------NGHGMRSPSPQGR 548
                |..|.   .::.:|.::.:.|. .|:.||..|:.|             .|..::|.:...|
  Fly   435 SKASGTNAALKPGSVTVARSSKSGAT-ASAPPAGSDEESVQYTGLAPLNCSFCGRPLKSVNALRR 498

  Fly   549 HYPHEQEAMDLEMEKHE 565
            |......  :::.::||
  Fly   499 HIASRHS--EIQGKEHE 513

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rib	NP_001261085.1	BTB	33..133	CDD:279045	36/101 (36%)
		BTB	44..133	CDD:197585	32/88 (36%)
		HTH_psq	373..417	CDD:283007	5/43 (12%)
CG12236	NP_727050.1	BTB	22..116	CDD:279045	35/95 (37%)
		BTB	33..116	CDD:197585	31/82 (38%)
		Herpes_capsid	<376..467	CDD:283714	16/91 (18%)
		C2H2 Zn finger	483..512	CDD:275371	4/30 (13%)
		C2H2 Zn finger	514..535	CDD:275371	125/602 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1229475at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000	-	-		otm40394
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR23110
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	4	4.020