DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rib and Nacc2

DIOPT Version :10

Sequence 1:NP_001261085.1 Gene:rib / 44855 FlyBaseID:FBgn0003254 Length:680 Species:Drosophila melanogaster
Sequence 2:NP_001094003.1 Gene:Nacc2 / 296583 RGDID:1309292 Length:585 Species:Rattus norvegicus


Alignment Length:419 Identity:100/419 - (23%)
Similarity:149/419 - (35%) Gaps:108/419 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 ILHALHE---VGSYVDCSLVVDDEQFQAHRVVLAANSPYFQHILKDVPQDHCSIILPG-VKGFEI 92
            :|..|:|   :|.|.|.|:||..:.|:|||.||||:|.||:.:...  ....:..||| |.....
  Rat    16 VLGCLNEQRLLGLYCDVSIVVKGQAFKAHRAVLAASSLYFRDLFSG--NSKSAFELPGTVPPACF 78

  Fly    93 AALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHASVTPTSSSGAGGAKPQNGSAS 157
            ..:|.:.|||:.|:..|::..::.||..||::.:.:..........:|...|       |.....
  Rat    79 QQILSFCYTGKLTMAASEQLVVMYTAGFLQIQHIVERGTDLMFKVSSPHCDS-------QTAMIE 136

  Fly   158 NHSSSVISTSTHISP-SAAISSSCSPPPPPQFGYQPGYSHYPQQQPMSASQIPA---GEAPLTPT 218
            :.||...|....:.| :||.::|.|.|.|    ......|...:.|      ||   |.|...|.
  Rat   137 DASSEPQSPCNQLQPATAAYATSPSVPIP----LLTRVKHEAMEMP------PATGPGLASKRPL 191

  Fly   219 QATPHSAASGAGEAGGQWPLTPSAAAAMLNSVYESAADMNPLKRKKLSAISSMLLSGNRDTPILR 283
            ...|....:.|..|.|    ||..|               |||..::|...         .|.|.
  Rat   192 DTGPRDGVAVATGAAG----TPGTA---------------PLKLPRVSYYG---------VPSLA 228

  Fly   284 NVLAQANPADSSQPGPMNANGEKTPTHPHQNTQLPAGLGVSGGERNHSFNGSDYGGDKEPLSPYT 348
            .::    |:....|.|   .||:|.         |....:...:...|::..|...|:.     .
  Rat   229 TLI----PSIQQVPYP---QGERTS---------PGASSLPTTDSPTSYHNEDEDDDEA-----Y 272

  Fly   349 DRSFEEETGQSGGKKPEWKRYKQYTRADMMCAIQ--------------AVREGMSALQASRKYGL 399
            |...||:.||            .|.:|....|:|              .:|..:.||.||....:
  Rat   273 DTMVEEQYGQ------------MYIKATGNYAVQEKPEPVPLESRSCVLIRRDLVALPASLISQI 325

  Fly   400 PSR---TLY---DKVRKLNITTGRGTHRT 422
            ..|   .||   |...||.:..|.|.:.|
  Rat   326 GYRCHPKLYSEGDPGEKLELVAGSGVYIT 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ribNP_001261085.1 BTB_POZ_BAB-like 42..125 CDD:349624 30/83 (36%)
HTH_psq 373..417 CDD:283007 14/63 (22%)
Nacc2NP_001094003.1 BTB_POZ_BTBD14A_NAC2 1..131 CDD:349598 36/123 (29%)
PHA03247 <138..260 CDD:223021 37/175 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 238..269 8/42 (19%)
BEN 370..447 CDD:214981
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 541..585
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.