Protein Alignment rib and Trl

DIOPT Version :9

• Sequence 1: NP_001261085.1
• Gene: rib / 44855
• FlyBaseID: FBgn0003254
• Length: 680
• Species: Drosophila melanogaster
• Sequence 2: NP_001261846.1
• Gene: Trl / 2768981
• FlyBaseID: FBgn0013263
• Length: 623
• Species: Drosophila melanogaster
• Alignment Length: 695
• Identity: 136/695 - (19%)
• Similarity: 228/695 - (32%)
• Gaps: 212/695 - (30%)

  Fly    18 YCLRWNNHQTNLVQILHALHEVGSYVDCSLVVDDEQFQAHRVVLAANSPYFQHILKDVPQDHCSI 82
            |.|.|.::.|:||..:..|...|..|||:|......|.||::||.|.||:...:||:.|..|..:
  Fly     9 YSLTWGDYGTSLVSAIQLLRCHGDLVDCTLAAGGRSFPAHKIVLCAASPFLLDLLKNTPCKHPVV 73

  Fly    83 ILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHASVTPTSSSGAG 147
            :|.||...::.|||:::|.||.:|..:|.|.:|:.|:.|.::||
  Fly    74 MLAGVNANDLEALLEFVYRGEVSVDHAQLPSLLQAAQCLNIQGL--------------------- 117

  Fly   148 GAKPQNGSASNHSSSVISTSTHISPSAAISSSCSPPPPPQFGYQPGYSHYPQQQPMSASQIPAGE 212
              .||..:..::::..|... |:.|                      .|:.|.|.::..
  Fly   118 --APQTVTKDDYTTHSIQLQ-HMIP----------------------QHHDQDQLIATI------ 151

  Fly   213 APLTPTQATPHS--------------AASGAGEAGGQWPLTPSAAAAMLNSVYES---AADMNPL 260
              .|..|.|.|:              |.:....||.|..:..:.||....:|.::   |....|.
  Fly   152 --ATAPQQTVHAQVVEDIHHQGQILQATTQTNAAGQQQTIVTTDAAKHDQAVIQAFLPARKRKPR 214

  Fly   261 KRK------KLSAISSM----------------------------LLSGNRDTPILRNVLAQANP 291
            .:|      |:|.:..|                            |||   .|||:::...:...
  Fly   215 VKKMSPTAPKISKVEGMDTIMGTPTSSHGSGSVQQVLGENGAEGQLLS---STPIIKSEGQKVET 276

  Fly   292 ADSSQPGPM-------NANGEKTPTHPHQNTQLPAGLGVSGGERNHSFNGSDYGGDKEPLSPYTD 349
            ..:..|..|       .|.||.||..        ...|.|||..:...:.......|.|
  Fly   277 IVTMDPNNMIPVTSANAATGEITPAQ--------GATGSSGGNTSGVLSTPKAKRAKHP------ 327

  Fly   350 RSFEEETGQSGGKKPEWKRYKQYTRADMMCAI--QAVREGMS-------------ALQASRKYGL 399
                     .|.:||   |.:..:.....|.|  ..:|:..:             .::..:|...
  Fly   328 ---------PGTEKP---RSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGVKKEKKSKS 380

  Fly   400 PSRTLYDKVRKLNITTGRGTHRTPKRSPPGAESSQG-FSYSAAAAAAAHNYGHGHGHHS---EVK 460
            .:.|..|...::| ||..|.:........||.|:.| .|.::...:::.:.|.|.|..|   .|.
  Fly   381 GNDTTLDSSMEMN-TTAEGDNTVGSDGAGGAGSAGGQSSATSGKKSSSGSSGSGSGALSSSGSVP 444

  Fly   461 RDQKVDHVPAHHGMPPTIPPSAAALLDHAFLQQALENR---------GG---------------- 500
            :.|.|..:....|:.....|.|.........||..:.:         ||
  Fly   445 QVQTVQSLHTLQGVQVKKDPDAQQQQQQQQQQQQQQQQQAMTVSGATGGQVQQQVQQVQQQVQQQ 509

  Fly   501 -----------------DMAGR---EALHAMALAAAAHAAANRLSSSPAEMDQRSNGHGMRSPSP 545
                             |.:|.   ....|.|.|||...||.:.....|:.|      |..|.:|
  Fly   510 QQQQQQQQQQLQHHQIIDSSGNITTATTSAQAAAAAQQQAAGQQQQLVAQSD------GSESGAP 568

  Fly   546 QGRHYPHEQEAMDLEMEKHEQNIIKRERDQDEREDADDEEDHEQE 590
            .........:...:....::.||...::.|.:::....::..:|:
  Fly   569 LSIAQVQTLQGHQIIGNLNQVNITDFQQQQPQQQQQQQQQQQQQQ 613

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rib	NP_001261085.1	BTB	33..133	CDD:279045	35/99 (35%)
		BTB	44..133	CDD:197585	32/88 (36%)
		HTH_psq	373..417	CDD:283007	9/58 (16%)
Trl	NP_001261846.1	BTB	27..117	CDD:279045	33/89 (37%)
		BTB	35..118	CDD:197585	32/105 (30%)
		GAGA	319..372	CDD:150045	9/70 (13%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	59	1.000	Domainoid score	I10615
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000	-	-		otm40394
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR23110
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	4	4.010