DRSC/TRiP Functional Genomics Resources

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Protein Alignment rib and abtb1

DIOPT Version :10

Sequence 1:NP_001261085.1 Gene:rib / 44855 FlyBaseID:FBgn0003254 Length:680 Species:Drosophila melanogaster
Sequence 2:XP_003199099.1 Gene:abtb1 / 100536189 ZFINID:ZDB-GENE-141212-241 Length:476 Species:Danio rerio


Alignment Length:102 Identity:36/102 - (35%)
Similarity:54/102 - (52%) Gaps:2/102 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 QILHALHEVGSYVDCSLVVDDEQFQAHRVVLAANSPYFQHILKDVPQDHCSIIL--PGVKGFEIA 93
            |.|..|.|.|:|.|.:.||..|.|:|||.:|:|.|.||.|:|:...:...:|.|  |.|......
Zfish   103 QFLQTLLEQGNYSDVTFVVHGEMFKAHRCILSARSEYFAHMLETKWKGKSAIALKHPLVNPAAFG 167

  Fly    94 ALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNL 130
            |::||.|||...:..:...:..|.||:.::..|.:.|
Zfish   168 AIMQYFYTGRLDIDVNYVEDCKRLAKQCKIGELIEEL 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ribNP_001261085.1 BTB_POZ_BAB-like 42..125 CDD:349624 29/84 (35%)
HTH_psq 373..417 CDD:283007
abtb1XP_003199099.1 ANKYR <6..102 CDD:440430
ANK repeat 35..66 CDD:293786
BTB1_POZ_ABTB1_BPOZ1 96..214 CDD:349604 36/102 (35%)
BTB2_POZ_ABTB1_BPOZ1 252..374 CDD:349605
BACK_ABTB1_BPOZ 374..445 CDD:350572
Blue background indicates that the domain is not in the aligned region.

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