DRSC/TRiP Functional Genomics Resources

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Protein Alignment pnr and GLN3

DIOPT Version :10

Sequence 1:NP_476685.1 Gene:pnr / 44849 FlyBaseID:FBgn0003117 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_010958.3 Gene:GLN3 / 856763 SGDID:S000000842 Length:730 Species:Saccharomyces cerevisiae


Alignment Length:494 Identity:107/494 - (21%)
Similarity:193/494 - (39%) Gaps:91/494 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LSDGDSTSDQQSTRDYPHFSGDYQNVTLSAASASTSASASATHVAA------VKMYHSSAVAAYT 63
            |:.|...|..::..|..:|:......|.:|.::.|:.:...|..|.      :.|:.|.|.....
Yeast    55 LNGGTFDSMLEALPDDLYFTDFVSPFTAAATTSVTTKTVKDTTPATNHMDDDIAMFDSLATTQPI 119

  Fly    64 DLAAA----GSAASAGVGVGVSGYHQQAVN----APVYVPSN-----RQYNHVAAHFGSAAAQNA 115
            |:||:    |..|... ...|..::....|    |.:..|::     .||||  ...|::.::::
Yeast   120 DIAASNQQNGEIAQLW-DFNVDQFNMTPSNSSGSATISAPNSFTSDIPQYNH--GSLGNSVSKSS 181

  Fly   116 WTTEGFGSAHAQFYSPNAAVMMGSWRSAYDPSGF-----QRSSPYESAMDFQFGEGRECVNCGAI 175
            .......::::....|  ::...|..:|.....|     |.::...|||:.......   |...|
Yeast   182 LFPYNSSTSNSNINQP--SINNNSNTNAQSHHSFNIYKLQNNNSSSSAMNITNNNNS---NNSNI 241

  Fly   176 STP-LWRRDGTGHYLCNACGLYHKMNGMNRPLIKPS----KRLVSATAT----------RRMGLC 225
            ..| |.:.|..|....|......| |.:.:|:...|    ||..|.:::          ::..:.
Yeast   242 QHPFLKKSDSIGLSSSNTTNSVRK-NSLIKPMSSTSLANFKRAASVSSSISNMEPSGQNKKPLIQ 305

  Fly   226 CTNCGTRTTTLWRRNNDGEPVCNACGLYYKLHGVNRPLAMRKDGIQTR--KRKPKKTGSGSAVGA 288
            |.||.|..|.||||:.:|..:||||||:.||||..|||:::.|.|:.|  |::.|:|....|...
Yeast   306 CFNCKTFKTPLWRRSPEGNTLCNACGLFQKLHGTMRPLSLKSDVIKKRISKKRAKQTDPNIAQNT 370

  Fly   289 GTGSGTGSTLEAIKECKEEHDLKPSLSLERHSLSKLHTD--MKSGTSSSSTLMGHHSAQQQQQQQ 351
            .:...|.||.......|.....|.  ||:::|||::..:  ::....:::.::..:.........
Yeast   371 PSAPATASTSVTTTNAKPIRSRKK--SLQQNSLSRVIPEEIIRDNIGNTNNILNVNRGGYNFNSV 433

  Fly   352 QQQQQQQQQQQQQSAHQQCFPLYGQTTTQQQHQQHGHSMTSSSGQAHLSARHL--HGAAGTQLYT 414
            ........|....|                      ::..:.:..|:|::.:|  |   .:...|
Yeast   434 PSPVLMNSQSYNSS----------------------NANFNGASNANLNSNNLMRH---NSNTVT 473

  Fly   415 P--------GSSSGGGSASAYTSHSAETPALSNGTPSPH 445
            |        .|:|...|:|:.:|..:..|.|..  |||:
Yeast   474 PNFRRSSRRSSTSSNTSSSSKSSSRSVVPILPK--PSPN 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pnrNP_476685.1 ZnF_GATA 168..212 CDD:238123 11/48 (23%)
ZnF_GATA 226..276 CDD:238123 27/51 (53%)
GLN3NP_010958.3 GAT1 56..715 CDD:227928 106/493 (22%)

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