DRSC/TRiP Functional Genomics Resources

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Protein Alignment pnr and GLN3

DIOPT Version :9

Sequence 1:NP_476685.1 Gene:pnr / 44849 FlyBaseID:FBgn0003117 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_010958.3 Gene:GLN3 / 856763 SGDID:S000000842 Length:730 Species:Saccharomyces cerevisiae


Alignment Length:494 Identity:107/494 - (21%)
Similarity:193/494 - (39%) Gaps:91/494 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LSDGDSTSDQQSTRDYPHFSGDYQNVTLSAASASTSASASATHVAA------VKMYHSSAVAAYT 63
            |:.|...|..::..|..:|:......|.:|.::.|:.:...|..|.      :.|:.|.|.....
Yeast    55 LNGGTFDSMLEALPDDLYFTDFVSPFTAAATTSVTTKTVKDTTPATNHMDDDIAMFDSLATTQPI 119

  Fly    64 DLAAA----GSAASAGVGVGVSGYHQQAVN----APVYVPSN-----RQYNHVAAHFGSAAAQNA 115
            |:||:    |..|... ...|..::....|    |.:..|::     .||||  ...|::.::::
Yeast   120 DIAASNQQNGEIAQLW-DFNVDQFNMTPSNSSGSATISAPNSFTSDIPQYNH--GSLGNSVSKSS 181

  Fly   116 WTTEGFGSAHAQFYSPNAAVMMGSWRSAYDPSGF-----QRSSPYESAMDFQFGEGRECVNCGAI 175
            .......::::....|  ::...|..:|.....|     |.::...|||:.......   |...|
Yeast   182 LFPYNSSTSNSNINQP--SINNNSNTNAQSHHSFNIYKLQNNNSSSSAMNITNNNNS---NNSNI 241

  Fly   176 STP-LWRRDGTGHYLCNACGLYHKMNGMNRPLIKPS----KRLVSATAT----------RRMGLC 225
            ..| |.:.|..|....|......| |.:.:|:...|    ||..|.:::          ::..:.
Yeast   242 QHPFLKKSDSIGLSSSNTTNSVRK-NSLIKPMSSTSLANFKRAASVSSSISNMEPSGQNKKPLIQ 305

  Fly   226 CTNCGTRTTTLWRRNNDGEPVCNACGLYYKLHGVNRPLAMRKDGIQTR--KRKPKKTGSGSAVGA 288
            |.||.|..|.||||:.:|..:||||||:.||||..|||:::.|.|:.|  |::.|:|....|...
Yeast   306 CFNCKTFKTPLWRRSPEGNTLCNACGLFQKLHGTMRPLSLKSDVIKKRISKKRAKQTDPNIAQNT 370

  Fly   289 GTGSGTGSTLEAIKECKEEHDLKPSLSLERHSLSKLHTD--MKSGTSSSSTLMGHHSAQQQQQQQ 351
            .:...|.||.......|.....|.  ||:::|||::..:  ::....:::.::..:.........
Yeast   371 PSAPATASTSVTTTNAKPIRSRKK--SLQQNSLSRVIPEEIIRDNIGNTNNILNVNRGGYNFNSV 433

  Fly   352 QQQQQQQQQQQQQSAHQQCFPLYGQTTTQQQHQQHGHSMTSSSGQAHLSARHL--HGAAGTQLYT 414
            ........|....|                      ::..:.:..|:|::.:|  |   .:...|
Yeast   434 PSPVLMNSQSYNSS----------------------NANFNGASNANLNSNNLMRH---NSNTVT 473

  Fly   415 P--------GSSSGGGSASAYTSHSAETPALSNGTPSPH 445
            |        .|:|...|:|:.:|..:..|.|..  |||:
Yeast   474 PNFRRSSRRSSTSSNTSSSSKSSSRSVVPILPK--PSPN 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pnrNP_476685.1 ZnF_GATA 164..212 CDD:214648 11/52 (21%)
ZnF_GATA 168..212 CDD:238123 11/48 (23%)
ZnF_GATA 223..270 CDD:214648 24/46 (52%)
ZnF_GATA 226..276 CDD:238123 27/51 (53%)
GLN3NP_010958.3 GAT1 56..715 CDD:227928 106/493 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 54 1.000 Domainoid score I2758
eggNOG 1 0.900 - - E1_COG5641
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000130
OrthoInspector 1 1.000 - - mtm9213
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10071
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1745
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.940

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