DRSC/TRiP Functional Genomics Resources

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Protein Alignment pnr and GZF3

DIOPT Version :9

Sequence 1:NP_476685.1 Gene:pnr / 44849 FlyBaseID:FBgn0003117 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_012425.1 Gene:GZF3 / 853334 SGDID:S000003646 Length:551 Species:Saccharomyces cerevisiae


Alignment Length:348 Identity:85/348 - (24%)
Similarity:122/348 - (35%) Gaps:114/348 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 CTNCGTRTTTLWRRNNDGEPVCNACGLYYKLHGVNRPLAMRKDGIQTRKRKPKKT---------- 280
            |.||.|.||.||||:..|..:||||||:.||||..||::::.|.|::|.||....          
Yeast   131 CKNCLTSTTPLWRRDEHGAMLCNACGLFLKLHGKPRPISLKTDVIKSRNRKSNTNHAHNLDNFRN 195

  Fly   281 --------------GSGSAVGAGTGS-----------GTGSTLEAIK----ECKEEHD------- 309
                          .||......|..           ||.||.:..|    |.||..|       
Yeast   196 QTLIAELKGDCNIESSGRKANRVTSEDKKKKSSQLLMGTSSTAKISKKPKTESKERSDSHLSATK 260

  Fly   310 -------------LKPSLSLERHSL--SKL-----HTDMKSGTSSSSTLMGHHSAQQQQQQQQQQ 354
                         |||.|..:..::  .||     :||:|..::|:     |.||..:::.|   
Yeast   261 LEVLMSGDCSRPNLKPKLPKQDTAIYQEKLLTFPSYTDVKEYSNSA-----HQSAFIKERSQ--- 317

  Fly   355 QQQQQQQQQQSAHQQCFPLYGQTTTQQQHQQHGHSMTSSSGQAHLSARHLHGAAGTQLYTPGSSS 419
                       .:...|||           ...||:||.:|.......||....|:...|..|::
Yeast   318 -----------FNAASFPL-----------NASHSVTSKTGADSPQLPHLSMLLGSLSSTSISNN 360

  Fly   420 GGGSASAYTSHSAET-----PALSNGTPSPHYQHHHHLGGTHGHHVTAAAAHH-----HFHAAAA 474
            |....|...:..|.|     |..|..|.|...:..:.:..|.......:|..:     .||.|:.
Yeast   361 GSEIVSNCNNGIASTAATLAPTSSRTTDSNPSEVPNQIRSTMSSPDIISAKRNDPAPLSFHMASI 425

  Fly   475 --------VAAYGVKTEASATNY 489
                    .|...||||.:..::
Yeast   426 NDMLETRDRAISNVKTETTPPHF 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pnrNP_476685.1 ZnF_GATA 164..212 CDD:214648
ZnF_GATA 168..212 CDD:238123
ZnF_GATA 223..270 CDD:214648 24/43 (56%)
ZnF_GATA 226..276 CDD:238123 26/49 (53%)
GZF3NP_012425.1 GAT1 4..551 CDD:227928 85/348 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341359
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5641
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2600
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000130
OrthoInspector 1 1.000 - - mtm9213
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10071
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1745
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.820

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