Protein Alignment pnr and COL4

DIOPT Version :10

• Sequence 1: NP_476685.1
• Gene: pnr / 44849
• FlyBaseID: FBgn0003117
• Length: 540
• Species: Drosophila melanogaster
• Sequence 2: NP_197875.3
• Gene: COL4 / 832563
• AraportID: AT5G24930
• Length: 362
• Species: Arabidopsis thaliana
• Alignment Length: 309
• Identity: 56/309 - (18%)
• Similarity: 95/309 - (30%)
• Gaps: 94/309 - (30%)

  Fly   169 CVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLVSATATRRMGLC--CTNCGT 231
            |.:|.:.:..|:.|.... :||.:|.  .|::..|        :|.|..|  |:.:|  |.....
plant     6 CDSCKSATAALYCRPDAA-FLCLSCD--SKVHAAN--------KLASRHA--RVWMCEVCEQAPA 57

  Fly   232 RTTTLWRRNNDGEPVCNACGLYYKLHGVNRPLAMRKDGIQTRKRKPKKTGSGSAVGAGTG----- 291
            ..|.    ..|...:|..|.  ..:|..| |||.|.:.:.........:..||.......
plant    58 HVTC----KADAAALCVTCD--RDIHSAN-PLARRHERVPVTPFYDSVSSDGSVKHTAVNFLDDC 115

  Fly   292 -----SGTGSTLEAIKECKEEHDLKPSLSLERHSLSKLHTDMKSGTSSSSTLMGHHSAQQQQQQQ 351
                 .|.||..|      ||.:....|.|         .:.|:.|::::.::...||::.....
plant   116 YFSDIDGNGSREE------EEEEAASWLLL---------PNPKTTTTATAGIVAVTSAEEVPGDS 165

  Fly   352 QQQQQQQQQ-----------------------QQQQSAHQQCFPLYGQTTTQQQHQQHGHSMTSS 393
            .:....||.                       :|..|......|:..:|.......::...|..:
plant   166 PEMNTGQQYLFSDPDPYLDLDYGNVDPKVESLEQNSSGTDGVVPVENRTVRIPTVNENCFEMDFT 230

  Fly   394 SGQAHLSARHLHGAAGTQLYTPGSSSGGGSASAYT--SHSAETPALSNG 440
            .|                  :.|.:.|||    |.  |||..:.::..|
plant   231 GG------------------SKGFTYGGG----YNCISHSVSSSSMEVG 257

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pnr	NP_476685.1	ZnF_GATA	168..212	CDD:238123	9/42 (21%)
		ZnF_GATA	226..276	CDD:238123	11/49 (22%)
COL4	NP_197875.3	Bbox1_BBX-like	5..48	CDD:380879	13/54 (24%)
		Bbox1_BBX-like	49..91	CDD:380879	12/48 (25%)
		CCT	295..337	CDD:461849