Protein Alignment pnr and grn

DIOPT Version :10

• Sequence 1: NP_476685.1
• Gene: pnr / 44849
• FlyBaseID: FBgn0003117
• Length: 540
• Species: Drosophila melanogaster
• Sequence 2: NP_001262366.1
• Gene: grn / 40962
• FlyBaseID: FBgn0001138
• Length: 712
• Species: Drosophila melanogaster
• Alignment Length: 520
• Identity: 174/520 - (33%)
• Similarity: 209/520 - (40%)
• Gaps: 174/520 - (33%)

  Fly     6 SDGDSTSDQQSTRDYPHFSGDYQNVTLSAASASTSASASATHVAAVKMYHSSAVAAYTD------ 64
            |...|:|.||..:.........|:.:.:.||::||||:||   ||..:..:.|.:|.|.
  Fly   265 SSNSSSSQQQQQQQQQQQQQQQQSSSNTTASSNTSASSSA---AAASLSAAVAASAATSSNGLFD 326

  Fly    65 -----LAAAGSAASAGVGVGVSGYHQQAVNAPVYVPSNRQYNHVAAHFGSA--AAQNAWTTEGFG 122
                 .::.||....|.|.|..||.         ..|...|:|.|||..:|  ||.|.:.:....
  Fly   327 GTAQAYSSGGSGGGGGGGSGSGGYD---------TSSYASYHHAAAHHQAAAVAAANMFQSSSVA 382

  Fly   123 SA-------------------------------HAQFYSPNAAVMMGSWR---------SAYDPS 147
            :|                               |....|......|||..         |.:..:
  Fly   383 AAAVRHSMAAAQAHHHHHHHHSGHHHSGSSSGLHGLGGSVGGTAGMGSMSGNSGGAGSLSGHSGA 447

  Fly   148 GFQ-----------RSSPYESAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNG 201
            |..           |:.|..||      ||||||||||.|||||||||||||||||||||:||||
  Fly   448 GSNAGSNCLDVKPVRTKPRTSA------EGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNG 506

  Fly   202 MNRPLIKPSKRLV---SATATRRMGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYYKLHGVNRPL 263
            .|||||||.:||.   ..:|.:|.|..|.||.|.||||||||..|||||||||||||||.|||||
  Fly   507 QNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPL 571

  Fly   264 AMRKDGIQTRKRK-----PKKTGSGSA---VGAGTGSGTGSTLEAIKECKEEHDLKPSLSLERHS 320
            .|:|:|||||.||     .||.|.|..   :|...|.|               |.||
  Fly   572 TMKKEGIQTRNRKLSSKSKKKKGLGGGCLPIGGHLGMG---------------DFKP-------- 613

  Fly   321 LSKLHTDMKSGTSSSSTLMGHHSAQQQQQQQQQQQQQQQQQQQQSAHQQCFPLYGQTTTQQQHQQ 385
                 .|...|..      |..||..                                     .|
  Fly   614 -----LDPSKGFG------GGFSASM-------------------------------------AQ 630

  Fly   386 HGHSMTSSSGQAHLSARHLHGAAGTQLYTPGSSSGGGSASAYTSHSAETPALSNGTPSPHYQHHH 450
            |||   .||| .|.:..|:||:    .||.|..:.|.|:......|  |....:|...||.|.:|
  Fly   631 HGH---LSSG-LHPAHAHMHGS----WYTGGMGALGASSGLQGGFS--TAGSLSGAVVPHSQPYH 685

  Fly   451  450
              Fly   686  685

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pnr	NP_476685.1	ZnF_GATA	168..212	CDD:238123	39/43 (91%)
		ZnF_GATA	226..276	CDD:238123	39/49 (80%)
grn	NP_001262366.1	ZnF_GATA	473..517	CDD:238123	39/43 (91%)
		ZnF_GATA	533..583	CDD:238123	39/49 (80%)