Protein Alignment pnr and GATAd

DIOPT Version :9

• Sequence 1: NP_476685.1
• Gene: pnr / 44849
• FlyBaseID: FBgn0003117
• Length: 540
• Species: Drosophila melanogaster
• Sequence 2: NP_001260326.1
• Gene: GATAd / 34395
• FlyBaseID: FBgn0032223
• Length: 842
• Species: Drosophila melanogaster
• Alignment Length: 352
• Identity: 91/352 - (25%)
• Similarity: 126/352 - (35%)
• Gaps: 113/352 - (32%)

  Fly     2 GILLSDGDSTSDQQSTRDYPHFSGDYQNVTLSAASASTSASASATHVAAVKMYHSSAVAAYTDL- 65
            |.||..|||:...:...|          :|.|.....|..|.|:.|         :..||.|.|
  Fly   529 GSLLDSGDSSDSHKLEMD----------ITSSINDRKTPDSLSSDH---------ATDAATTQLW 574

  Fly    66 -AAAGSAASAGVGVGVSGYHQQAVNAPVY--VPSNRQYNHVAAHFGSAAAQNAWTTEGFGSAHAQ 127
             |.|.|||.:......|...:..::.|..  |||...:..|
  Fly   575 QALARSAAKSKEDNPASQIFRNMMSQPFAFPVPSTVSFTKV------------------------ 615

  Fly   128 FYSPNAAVMMGSWRSAYDPSGFQRSSPYESAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNA 192
               |...:.:     ..|.|..|.|..........|....:|::       :...:.|..|..:.
  Fly   616 ---PEEPIAL-----LKDLSEAQSSKSKPCRRKQSFPTKTDCID-------VVNENVTDTYTTSE 665

  Fly   193 CGLYHKMNGMNRPLIKPSKR---LVSATATRRMGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYY 254
            .          .|..|..||   |.:|....:..:.|:||||.|||:|||:..||.||||||||:
  Fly   666 A----------TPDDKKDKRNINLFNAIPGAQKDMSCSNCGTLTTTIWRRSVRGEMVCNACGLYF 720

  Fly   255 KLHGVNRPLAMRKDGIQTRKRKPKKTGSGSAVGAGTGSGTGSTLEAIKECKEEHDLKPSLSLERH 319
            ||||||||.:||:|.|.||:|:||:                                    |||.
  Fly   721 KLHGVNRPHSMRRDTIHTRRRRPKE------------------------------------LERS 749

  Fly   320 SLSKLHTDMKSGTSSSSTLMGHHSAQQ 346
              .|.|..|.|.:|..:|.....:|::
  Fly   750 --KKKHKQMSSCSSIETTKQDFLTARE 774

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pnr	NP_476685.1	ZnF_GATA	164..212	CDD:214648	5/47 (11%)
		ZnF_GATA	168..212	CDD:238123	5/43 (12%)
		ZnF_GATA	223..270	CDD:214648	32/46 (70%)
		ZnF_GATA	226..276	CDD:238123	35/49 (71%)
GATAd	NP_001260326.1	zf-AD	<228..284	CDD:214871
		ZnF_GATA	688..736	CDD:214648	32/47 (68%)
		ZnF_GATA	691..742	CDD:238123	35/50 (70%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45438450
Domainoid	1	1.000	62	1.000	Domainoid score	I2939
eggNOG	1	0.900	-	-		E1_COG5641
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S2600
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000130
OrthoInspector	1	1.000	-	-		mtm9213
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR10071
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	8	7.790