DRSC/TRiP Functional Genomics Resources

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Protein Alignment pnr and Gata4

DIOPT Version :10

Sequence 1:NP_476685.1 Gene:pnr / 44849 FlyBaseID:FBgn0003117 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_001297539.1 Gene:Gata4 / 14463 MGIID:95664 Length:442 Species:Mus musculus


Alignment Length:416 Identity:158/416 - (37%)
Similarity:207/416 - (49%) Gaps:78/416 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 GDYQNVTLSAASASTSASASATHVAAVKMYHSSAVAAYTDLAAAGSAASAGV------GVGVS-- 81
            |.|:.....|...|..|::|..:|...::  .|:|...:.|...||||:||.      |.|.|  
Mouse    16 GAYEAGGPGAFMHSAGAASSPVYVPTPRV--PSSVLGLSYLQGGGSAAAAGTTSGGSSGAGPSGA 78

  Fly    82 ---------GYHQQAVNAPVYVP---SNR-----QYNHVAAHFGSAAAQNA-------------- 115
                     |:.|.......|.|   |.|     ....:||...:|||:.|              
Mouse    79 GPGTQQGSPGWSQAGAEGAAYTPPPVSPRFSFPGTTGSLAAAAAAAAAREAAAYGSGGGAAGAGL 143

  Fly   116 -----WTTEGFGSAHAQFYSPNAAVMMGSWRSAYDPSGFQRSSP-------------YESAMDF- 161
                 :...||..:::..|....|.:..||.:|...|.....||             :.:.:|. 
Mouse   144 AGREQYGRPGFAGSYSSPYPAYMADVGASWAAAAAASAGPFDSPVLHSLPGRANPGRHPNLVDMF 208

  Fly   162 -QFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLVSATATRRMGLC 225
             .|.||||||||||:||||||||||||||||||||||||||:|||||||.:||   :|:||:||.
Mouse   209 DDFSEGRECVNCGAMSTPLWRRDGTGHYLCNACGLYHKMNGINRPLIKPQRRL---SASRRVGLS 270

  Fly   226 CTNCGTRTTTLWRRNNDGEPVCNACGLYYKLHGVNRPLAMRKDGIQTRKRKPK-----KTGSGSA 285
            |.||.|.||||||||.:|||||||||||.|||||.|||||||:||||||||||     ||.:|.|
Mouse   271 CANCQTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMRKEGIQTRKRKPKNLNKSKTPAGPA 335

  Fly   286 ---VGAGTGSGTGSTLEAIKECKEEHDLKPSLSLERHSLSKLHTDMKSGTSSSSTLMGH----HS 343
               :...:|:.:|::..|........:::|..:  ...||..:....|.:.:.||:.||    |.
Mouse   336 GETLPPSSGASSGNSSNATSSSSSSEEMRPIKT--EPGLSSHYGHSSSMSQTFSTVSGHGPSIHP 398

  Fly   344 AQQQQQQQQQQQQQQQQQQQQSAHQQ 369
            .....:...|.......|..|::.:|
Mouse   399 VLSALKLSPQGYASPVTQTSQASSKQ 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pnrNP_476685.1 ZnF_GATA 168..212 CDD:238123 40/43 (93%)
ZnF_GATA 226..276 CDD:238123 41/49 (84%)
Gata4NP_001297539.1 GATA-N 1..204 CDD:461628 41/189 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 60..107 12/46 (26%)
ZnF_GATA 216..266 CDD:238123 43/52 (83%)
ZnF_GATA 270..321 CDD:238123 41/50 (82%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 314..393 24/80 (30%)

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