DRSC/TRiP Functional Genomics Resources

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Protein Alignment pnr and GATA5

DIOPT Version :9

Sequence 1:NP_476685.1 Gene:pnr / 44849 FlyBaseID:FBgn0003117 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_536721.1 Gene:GATA5 / 140628 HGNCID:15802 Length:397 Species:Homo sapiens


Alignment Length:373 Identity:143/373 - (38%)
Similarity:188/373 - (50%) Gaps:81/373 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 YQNVTLSAA--SASTSASASATH--------------VAAVKMYHSSA--------VAAYTDLAA 67
            ||::.|:|:  .|:.:.|.|..|              |.::..|.|..        :||....|.
Human     2 YQSLALAASPRQAAYADSGSFLHAPGAGSPMFVPPARVPSMLSYLSGCEPSPQPPELAARPGWAQ 66

  Fly    68 AGSAASAGVGVGVSGYHQQAVNAP-------VYVPSNRQYNHVAAHFGSAAAQNAWTTEGFGSAH 125
            ..:|.|:..|.|  ..|..|.:.|       .:.||.      ....|||..::....:|.....
Human    67 TATADSSAFGPG--SPHPPAAHPPGATAFPFAHSPSG------PGSGGSAGGRDGSAYQGALLPR 123

  Fly   126 AQFYSPNAAVMMGSWRSAY------DPSGFQRSSPYESAM-------------DF--QF-GEGRE 168
            .||.:|....:..|:.:.|      |.:....:.|::.::             ||  :| |||||
Human   124 EQFAAPLGRPVGTSYSATYPAYVSPDVAQSWTAGPFDGSVLHGLPGRRPTFVSDFLEEFPGEGRE 188

  Fly   169 CVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLVSATATRRMGLCCTNCGTRT 233
            ||||||:||||||||||||||||||||||||||:||||::|.|||   :::||.|||||||.|..
Human   189 CVNCGALSTPLWRRDGTGHYLCNACGLYHKMNGVNRPLVRPQKRL---SSSRRAGLCCTNCHTTN 250

  Fly   234 TTLWRRNNDGEPVCNACGLYYKLHGVNRPLAMRKDGIQTRKRKPKKTGS--GSAVGAGTGSGTGS 296
            |||||||::|||||||||||.|||||.|||||:|:.|||||||||....  ||:......|.:.|
Human   251 TTLWRRNSEGEPVCNACGLYMKLHGVPRPLAMKKESIQTRKRKPKTIAKARGSSGSTRNASASPS 315

  Fly   297 TLEAIKECKEEHDLKPSLS---------------LERHSLSKLHTDMK 329
            .:.:..........||||:               .|..||:..|.:.|
Human   316 AVASTDSSAATSKAKPSLASPVCPGPSMAPQASGQEDDSLAPGHLEFK 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pnrNP_476685.1 ZnF_GATA 164..212 CDD:214648 42/47 (89%)
ZnF_GATA 168..212 CDD:238123 38/43 (88%)
ZnF_GATA 223..270 CDD:214648 37/46 (80%)
ZnF_GATA 226..276 CDD:238123 39/49 (80%)
GATA5NP_536721.1 GATA-N 1..170 CDD:283099 34/175 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 48..116 15/75 (20%)
ZnF_GATA 184..229 CDD:214648 41/44 (93%)
ZnF_GATA 188..232 CDD:238123 38/43 (88%)
ZnF_GATA <253..293 CDD:238123 32/39 (82%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 281..356 22/74 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165142153
Domainoid 1 1.000 81 1.000 Domainoid score I8514
eggNOG 1 0.900 - - E1_COG5641
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 223 1.000 Inparanoid score I3525
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000130
OrthoInspector 1 1.000 - - otm40560
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10071
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1745
SonicParanoid 1 1.000 - - X1091
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1110.880

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