Protein Alignment hmg20a and Dsp1

DIOPT Version :9

• Sequence 1: NP_001006760.1
• Gene: hmg20a / 448440
• XenbaseID: XB-GENE-955353
• Length: 345
• Species: Xenopus tropicalis
• Sequence 2: NP_001138203.1
• Gene: Dsp1 / 117294
• FlyBaseID: FBgn0278608
• Length: 397
• Species: Drosophila melanogaster
• Alignment Length: 305
• Identity: 66/305 - (21%)
• Similarity: 114/305 - (37%)
• Gaps: 49/305 - (16%)

 Frog     5 ASAAPPSSEDLVVDTKENAEPPFCGISLSGSSQAPFHPQSPTLQQDERDELILQQSGEQQLGNSG 69
            |:||.|.|:.......:..........|....|.....|....||.::.:.:.||..:|.:.||.
  Fly   107 AAAAVPGSQWWYSAANQGQVDANTAAQLQHQQQQQQQQQQQQQQQHQQQQQMQQQQQQQNVINSA 171

 Frog    70 ELRQEEELPKTRRGGWTKGRKRKRSPRDNNAPKAPLTGYVRFMNERREQLRTERPD--VPFPEIT 132
            .       |.:|             .:.:..|:..:|.|..|:...||:.:.:.||  |.|.|.:
  Fly   172 S-------PMSR-------------VKADAKPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFS 216

 Frog   133 RIVGSEWSKLPAHEKQHYLDEAEKDKERYTKELQQYQNTDAYQTYSRKAQSRQKGRQQRQEGVRG 197
            |.....|..:...||:.:.:.|||||:||..|:|.|        ...|.....:|::::|.....
  Fly   217 RKCAERWKTMVDKEKKRFHEMAEKDKQRYEAEMQNY--------VPPKGAVVGRGKKRKQIKDPN 273

 Frog   198 VP----------INTEKESILKERPIFDIPIFTEEFLNHSKAREAELRQLRKSNMEFE----ERN 248
            .|          .|.|:..:....|.|.:....:|........:.|::|..:|..|.:    ||.
  Fly   274 APKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYERE 338

 Frog   249 AALQKHVESMRSAVQRLEAELNQEQERNSLL-----QQHLQSVRQ 288
            ....|....:..:...::|.:..:.::.:||     |||.|...|
  Fly   339 MTEYKTSGKIAMSAPSMQASMQAQAQKAALLAAAAQQQHQQLEEQ 383

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
hmg20a	NP_001006760.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..124		23/118 (19%)
		NHP6B	48..>181	CDD:227935	34/134 (25%)
		HMGB-UBF_HMG-box	101..166	CDD:238686	23/66 (35%)
		SMC_prok_A	<141..322	CDD:274009	36/167 (22%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	167..198		4/30 (13%)
Dsp1	NP_001138203.1	HMG-box	182..252	CDD:294061	24/69 (35%)
		HMGB-UBF_HMG-box	275..339	CDD:238686	12/63 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R3288
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.940