DRSC/TRiP Functional Genomics Resources

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Protein Alignment nkd and nkd2b

DIOPT Version :9

Sequence 1:NP_524788.2 Gene:nkd / 44843 FlyBaseID:FBgn0002945 Length:928 Species:Drosophila melanogaster
Sequence 2:NP_001091055.1 Gene:nkd2b / 794221 ZFINID:ZDB-GENE-081013-6 Length:409 Species:Danio rerio


Alignment Length:626 Identity:114/626 - (18%)
Similarity:191/626 - (30%) Gaps:275/626 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 GRSHPGHTAHPQDVSSGGSHSKHLRISSTSNGKHGKYSNMQQQLPQDEDVVDAAATMQQ------ 153
            |:.|..|....::...|.|...:..|:..:..:..:|.|..:.. ::|::.|...|:..      
Zfish     2 GKLHSKHACKRRENPEGDSFVVNGFIAKRAAEEDERYGNNLKDY-KNEELKDGRLTLLHCPLQVV 65

  Fly   154 ------------QQHTGHAHSRHLHHHKEERIRLEEFTCDVSV-EGGKSSQPLQFSFTFYDLDGH 205
                        .|:.............::||.|::..|:||: |..:.    ::.||.||.| :
Zfish    66 LPPEKAEGCESFLQYLSPDDGERDAQKVKKRISLQDLECNVSLAEDNRQ----EWVFTLYDFD-N 125

  Fly   206 HGKITKDDIVGIVYTIYESIGKSVVVPH-CGSK--TINVRLTVSPEGKSKSQPVVPVPVAAGFSS 267
            .||:||:|:..:::|||:.:..|  |.| |.:|  ::.|:|:|:||           |.|....:
Zfish   126 SGKVTKEDMSSLMHTIYDVVDAS--VKHSCNTKRRSLRVKLSVTPE-----------PAARRRDA 177

  Fly   268 SHASKLKKLPTGLAAMSKPLAGGGVGSGGASALTTSAGNRRQHRYRPRKLIKSDDEDDDSNSEKE 332
            :|..:    .|...:..:|:                  ...:||...|:                
Zfish   178 THTER----ETSHLSQVEPV------------------RSEEHRSADRR---------------- 204

  Fly   333 KDAAHAPAADQPSGSGTKATGKSHHHQSQSARYHQKNNSRAEQCCTEQNTPDNGHNTYENMLNLK 397
                                 :|.|.:.|: ..|:.|:     .|.::||....|  |.::..::
Zfish   205 ---------------------QSTHIRGQT-EAHEGNH-----YCVDENTERRNH--YLDLAGIE 240

  Fly   398 -------CCKPEVDQVDCPSHRQHHQSHPNHQMRQQDIYMKQATQRVKMLRRARKQKYQ-----D 450
                   ...|:.|| |.||...|.||.|:.|..:..:|.:            |.|..:     |
Zfish   241 NYTSRFDSSSPDADQ-DPPSRSSHSQSRPHSQEPETHVYQR------------RSQLIEPCVAPD 292

  Fly   451 HCLET-----RQRS-----------LSVGNDSACPNRHLQLQQP-PVGHPQPQSLNHKSASGSPP 498
            ..|.|     |.||           .:|...|.|...|    || |.|    |.:.|.:      
Zfish   293 PRLRTGPQLIRSRSPKGSSRFPGVIPNVTKTSKCHGHH----QPIPTG----QDVYHLT------ 343

  Fly   499 LGVGGGGDMMLDGVQLRQPRPHSLTP----HQHQQQNQQQQQQQRKSAECWKSALNRNDLISIIR 559
                            :|...|:.||    |.|.::                             
Zfish   344 ----------------QQNHTHAHTPSGLQHSHSRR----------------------------- 363

  Fly   560 ESMEKNRLCFQLNGKPQANVSPIRQPAAQQQPQQQQRQRCNTGSKIPTLITNHSPVAQQSPLSCS 624
                                  ||..|.:||            :..|...||.:.:.|:      
Zfish   364 ----------------------IRSRAREQQ------------ALTPVKNTNATALVQR------ 388

  Fly   625 PPTAEPTTPSIPAAPPAIEVNGQQHHPTHPTHPSHHNHHEH 665
                                  .:||..|..|..||.||.|
Zfish   389 ----------------------HEHHHHHEHHHHHHYHHYH 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nkdNP_524788.2 None
nkd2bNP_001091055.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 166..224 17/133 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 243..315 20/84 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 346..367 7/71 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 388..409 9/48 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595742
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003914
OrthoInspector 1 1.000 - - otm24879
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22611
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4689
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
66.060

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