DRSC/TRiP Functional Genomics Resources

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Protein Alignment nkd and nkd1

DIOPT Version :9

Sequence 1:NP_524788.2 Gene:nkd / 44843 FlyBaseID:FBgn0002945 Length:928 Species:Drosophila melanogaster
Sequence 2:NP_001036798.1 Gene:nkd1 / 751108 ZFINID:ZDB-GENE-061108-3 Length:440 Species:Danio rerio


Alignment Length:565 Identity:109/565 - (19%)
Similarity:179/565 - (31%) Gaps:227/565 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 SNGKHGKYSNMQQQLPQDEDVVDAAATMQQQQHTGHAHSRHLHHHKEERIRLEEFTCDVSVEGGK 188
            :.|...::..::..||.::  .|:.:..::.|  |...|..:..||:  ::.||..|.||||   
Zfish    74 AEGISDEHYRLEVALPPEK--TDSCSVEERMQ--GTEGSATVGPHKQ--LQFEELECAVSVE--- 129

  Fly   189 SSQPLQFSFTFYDLDGHHGKITKDDIVGIVYTIYESIGKSVVVPHCGSKTINVRLTVSPEGKSKS 253
            .....:::||.||.| ::||:|::||..:::||||.:..||......|||:.|:|:|:|:...:.
Zfish   130 EDNRQEWTFTLYDFD-NNGKVTREDITSLLHTIYEVVDASVNHSPSSSKTLRVKLSVAPDSSQRW 193

  Fly   254 QPVVPVPVAAGFSSSHASKLKKLPTGLAAMSKPLAGGGVGSGGASALTTSAGNRRQHRYRPRKLI 318
            :                                         ..:...|...|   .:::..|.|
Zfish   194 K-----------------------------------------NCTQTNTDTPN---PKHKGEKCI 214

  Fly   319 KSDDEDDDSNSEKEKDA----AHAPAADQPSGSGTKATGKSHHHQSQSARYHQKNNSRAEQCCTE 379
                 :|...|||:..|    .||                 .||..|..:.|          |.:
Zfish   215 -----EDSKTSEKKSRAFLRRYHA-----------------EHHSQQGCQRH----------CVD 247

  Fly   380 QNTPDNGHNTYENMLNLK-------CCKPEVDQVDCPSH--RQHHQS------------HPNHQM 423
            :|.....|  |.::..::       ...|..:... |:|  |..:||            ||.|..
Zfish   248 ENLERRNH--YLDLAGIENYTSRFGTAAPATEPAK-PTHATRSSNQSRSRSQEPENGQVHPAHHR 309

  Fly   424 RQQDIYMKQATQRVKMLRRARKQKYQDHCLETRQRSLSVGNDSACPNRHLQLQQPPVGHPQPQSL 488
            |.|.:    :|....:|.|      ..|.|.:             |..|   :.||.    ..|.
Zfish   310 RSQTM----STDPPAILTR------HTHALRS-------------PKTH---RTPPT----QASA 344

  Fly   489 NHKSASGSPPLGVGGGGDMMLDGVQLRQPRPHSLTPHQHQQQNQQQQQQQRKSAECWKSALNRND 553
            ......|:||                 .|...:.|| .||.....::.:||.     |.||:...
Zfish   345 GRVMRRGAPP-----------------PPSVPNQTP-PHQSSGPYRRHKQRP-----KEALHYRA 386

  Fly   554 LISIIRESMEKNRLCFQLNGKPQANVSPIRQPAAQQQPQQQQRQRCNTGSKIPTLITNHSPVAQQ 618
            |                   .|.....|:.:       ::..|.       :|:|:.....:|| 
Zfish   387 L-------------------GPSVTSGPVLE-------KEHVRD-------LPSLVLYEGGLAQ- 417

  Fly   619 SPLSCSPPTAEPTTPSIPAAPPAIEVNGQQHHPTHPTHPSHHNHH 663
                                    .|...:||..|..|  ||.||
Zfish   418 ------------------------VVQRHEHHHHHEHH--HHYHH 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nkdNP_524788.2 None
nkd1NP_001036798.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 192..221 5/77 (6%)
Totivirus_coat <268..370 CDD:253234 29/150 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 272..379 31/160 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 421..440 8/18 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595738
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2CN06
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003914
OrthoInspector 1 1.000 - - otm24879
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR22611
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.930

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