DRSC/TRiP Functional Genomics Resources

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Protein Alignment nkd and Nkd1

DIOPT Version :9

Sequence 1:NP_524788.2 Gene:nkd / 44843 FlyBaseID:FBgn0002945 Length:928 Species:Drosophila melanogaster
Sequence 2:NP_001258310.1 Gene:Nkd1 / 364952 RGDID:1308491 Length:471 Species:Rattus norvegicus


Alignment Length:632 Identity:128/632 - (20%)
Similarity:194/632 - (30%) Gaps:257/632 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 GRSH-PGHTAHPQDVSSGGSHSKHLR--ISSTSNGKHGKYSN----MQQQLPQDEDVVDAAAT-- 150
            ||.. ||..:.|:.:...|:..:..|  :..||....|:...    ::..||.::  .|:..:  
  Rat    39 GRQRCPGSVSGPRQLRLAGTVGRGARELVGDTSREALGEGDEDDFPLEVALPPEK--TDSLVSGD 101

  Fly   151 ---MQQQQHTGHAHSRHLHHHKEERIRLEEFTCDVSVEGGKSSQPLQFSFTFYDLDGHHGKITKD 212
               |::....|.|        .:::::.||..||||||   .....:::||.||.| ::||:|::
  Rat   102 EKRMEKLSEPGQA--------SKKQLKFEELQCDVSVE---EDSRQEWTFTLYDFD-NNGKVTRE 154

  Fly   213 DIVGIVYTIYESIGKSVVVPHCGSKTINVRLTVSPEGKSKSQPVVPVPVAAGFSSSHASKLKKLP 277
            ||..:::||||.:..||......|||:.|:|||:|:|....:.|:         .:|.......|
  Rat   155 DITSLLHTIYEVVDSSVNHSPTSSKTLRVKLTVAPDGSQSKRSVL---------FNHTDLQSARP 210

  Fly   278 TGLAAMSKPLAGGGVGSGGASALTTSAGNRRQHRYRPRKLIKSDDEDDDSNSEKEKDAAHAPAAD 342
               .|.:||          |..|   .|..:|.|                          ||...
  Rat   211 ---RADTKP----------AEEL---RGWEKQQR--------------------------APLRF 233

  Fly   343 QPSGSGTKATGKSHHHQSQSARYHQKNNSRAEQCCTEQNTPDNGHNTYENMLNLKCCKPEVDQVD 407
            |         |.||..|...  ||.         |.::|.....|  |.::..:           
  Rat   234 Q---------GDSHLEQPDC--YHH---------CVDENIERRNH--YLDLAGI----------- 265

  Fly   408 CPSHRQHHQSHPNHQMRQQDIYMKQATQRVKMLRRARKQKYQDHCLETRQRSLSVGNDSACPNRH 472
                                                     :::..:....|.||...|..|   
  Rat   266 -----------------------------------------ENYTSQFGPGSPSVAQKSELP--- 286

  Fly   473 LQLQQPPVGHPQPQSLNHKSASGSP---PLGVGGGGDMMLDGVQLRQPRPHSLTPHQHQQQNQQQ 534
                 |.:.:|.....:...|:..|   |.||..|...:||            ||.....:.|| 
  Rat   287 -----PRISNPTRSRSHEPEAAHIPHRRPQGVDPGSFHLLD------------TPFVKASEPQQ- 333

  Fly   535 QQQQRKSAECWKSALNRNDLISIIRESMEKNRLCFQLNGKPQANVSPIRQPAAQQQPQQQQRQRC 599
                                               :|.|....|...:|.|.||.:.........
  Rat   334 -----------------------------------RLRGTQDGNKQFVRSPKAQGKNMGMGHVAR 363

  Fly   600 NTGSKIPTLITNH--SPVAQQSPLSCSPPTAEPTTPSI---------------------PAAP-- 639
            .|.||.|.:.|.|  ||.|..:    :.|...||.|.:                     |.|.  
  Rat   364 GTRSKPPLVPTTHTVSPSAHLA----TGPALLPTLPPLGHKKHKHRAKESQASCRGLQAPLAAGG 424

  Fly   640 ------------PAIEV----NGQ--QHHPTHPTHPSHHNHHEHPQP 668
                        ||:.|    .||  |.|..|..|..||::|...||
  Rat   425 STIMGREQVRELPAVVVYESQAGQSIQRHEHHHHHEHHHHYHHFYQP 471



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353604
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2CN06
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003914
OrthoInspector 1 1.000 - - otm45405
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR22611
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.930

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