Sequence 1: | NP_727769.3 | Gene: | mud / 44839 | FlyBaseID: | FBgn0002873 | Length: | 2567 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009300267.1 | Gene: | clip1a / 797680 | ZFINID: | ZDB-GENE-060526-282 | Length: | 1569 | Species: | Danio rerio |
Alignment Length: | 1682 | Identity: | 370/1682 - (21%) |
---|---|---|---|
Similarity: | 658/1682 - (39%) | Gaps: | 472/1682 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 30 SDLDSFFSVFIQKIQETENV-KGKNELQDQPTEQSPLVQEFLAHNYPEFIAQQD-------DKEV 86
Fly 87 DLPL---DCLYVYTLLLHYSCVKKPSLF--FHNICN-KLPELTQTCIASFFRETVDRLLTREYLS 145
Fly 146 QAIANVAVVYRQGVSTSVSPCLPSSSLSPDPRSDDAPCPSTPSSSSSQPSSSTPQLRNHREQLRL 210
Fly 211 NGCEMPPPSTPKTELLEQRTKELRGIRTQLEVVRYEKALLEEQQMEKDELIKVLNKEKMMAKMEL 275
Fly 276 EKLRNVKLTEEHHDNESHHIMPYEFEHMKGCLLKEIGLKESLIAEITDKLHDLRVENSELSEKLN 340
Fly 341 LAGKRLLEYTDRIRFLESRVDDLTRIVSSRDVMISSLESDKQELDKCLKEARDDLHNRIEVLNAS 405
Fly 406 SDLLDCSLSPNTTPENLASSVIDKQLREKEHENAELKEKLLNLNNSQRELCQALSSFLQKHNIDH 470
Fly 471 EFPVEWTSSSLLSTISAIESKFVNTLEKSTQMKKECDVQSVCVEKLLEKCKLLSVSLGCQPKELD 535
Fly 536 GFEATIPEAMESGFESSRECETILSCCHMKVVDIASKNNDLELDNERLNDKCAELKSIIDRGDQH 600
Fly 601 LADINLQLIEKEKQIKDVGAEIQELRKRNINLENMLSQIADKEASA-ASHAQHLKQCGELLRAKY 664
Fly 665 EVCRNELIAKNAAQDELVRMMMVPDGETLNGRVRQLIDLEMMHDEHNKMYAQMLKQLNELSAKH- 728
Fly 729 --------DNMTHSHLDFVKRTEIELETKNAQIMAFDEHNNHFDRFLTRIFTLLRSRNCPKSTTM 785
Fly 786 GSATNFLESMHIEKRFENIEMLIE-----GQLLSADDLKRELDDLRSKNEELAKQNINGIIKRNK 845
Fly 846 FITSLEV----NTEKVKQYITDLEE---EAFKRKQKVVQLENTLSKEQSNAKEMAQRLDIAQQEI 903
Fly 904 KDYHVEAIRFINTIRDRLQQDFNGVNTPQQLGTCMTEFLKMYDQMEVRYEESSSLVEKLTESQAK 968
Fly 969 LEMQVAELQVELENKDTNQHSGALIKQLNDTIQNLEKV--NAKLSEDNTVSHTV-HSKLNESLLK 1030
Fly 1031 AQKELDLRAKIIENLEASERNLSMKLCELKDLKNKLKSSDEKIAQIKE----------------- 1078
Fly 1079 --------TYEEQIKALQAKCDMEAKKNEHLERNQNQSLTQLKEDALENCVLMSTKLEELQAKLQ 1135
Fly 1136 EGQQLV---DSQKLELDMNRKELALVKSAYEAQTKLSDDLQRQKESGQQLVDNLKVELEKERKEL 1197
Fly 1198 AHVNSAIGAQTKLSDDLECQKESGQQLVDNLKVE---LEKERKELAQVKSVIEAQTKLSDDLQRE 1259
Fly 1260 KESA----------QQLVDNLKVELDKERKELAQVNSAFEAQTKLS---DDLQRQKESAQQLVDN 1311
Fly 1312 LKVELDKERKELAQVNSAFEAQTKLSDDLQREKESAQQLVDNLKVELDKERKELAQVKSVIEAQT 1376
Fly 1377 KLSDDLQRQKES-----AQQLVD-----NLKVELDKERKELAKVKSVIEAQTKLSDDLQRQKESA 1431
Fly 1432 QQ-LEAQTKLSDDLQRQKESAQQLVDNLKVELDKERKEL-AQVKSVIEAQTKLSDDLQRQKESAQ 1494
Fly 1495 QLVDNLKMELDKERKELAQVKSAIGA---QTK-LSDDLECQKESVQQLVDNLKVELEKERKELAK 1555
Fly 1556 VNSAFEAQTKLSDDLKLQ-----KEDAQREVFLVKERLVKEKREFEVKLATLEDIIE 1607 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
mud | NP_727769.3 | SMC_prok_B | 319..1178 | CDD:274008 | 192/911 (21%) |
SCP-1 | 853..1571 | CDD:114219 | 181/783 (23%) | ||
Smc | 1234..>1944 | CDD:224117 | 101/408 (25%) | ||
DUF948 | 1392..1517 | CDD:295114 | 34/131 (26%) | ||
clip1a | XP_009300267.1 | CAP_GLY | 55..118 | CDD:279625 | |
CAP_GLY | 193..256 | CDD:279625 | 16/65 (25%) | ||
Smc | <333..1004 | CDD:224117 | 204/947 (22%) | ||
SCP-1 | 709..1402 | CDD:114219 | 175/779 (22%) | ||
COG7 | 720..>871 | CDD:287200 | 40/201 (20%) | ||
SPEC | 940..1119 | CDD:295325 | 42/188 (22%) | ||
GluZincin | 1227..>1365 | CDD:301352 | 40/147 (27%) | ||
CLIP1_ZNF | 1507..1524 | CDD:293247 | |||
CLIP1_ZNF | 1547..1563 | CDD:293247 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |