Sequence 1: | NP_727769.3 | Gene: | mud / 44839 | FlyBaseID: | FBgn0002873 | Length: | 2567 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_036010996.1 | Gene: | Golga4 / 54214 | MGIID: | 1859646 | Length: | 2280 | Species: | Mus musculus |
Alignment Length: | 2407 | Identity: | 507/2407 - (21%) |
---|---|---|---|
Similarity: | 947/2407 - (39%) | Gaps: | 587/2407 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 120 PELTQTCIASFFRETVDRLLTREYLSQAIANVAVVYRQ---GVSTSVSPCLPSSSL--------S 173
Fly 174 PDPRSDDAPCPS------------------------TPSSSSSQPSSSTPQLR-NHREQLR---- 209
Fly 210 -LNGCEMPPPSTPKTEL-----------LEQRTKELRGIRTQLEVVR--YEKALLEEQ--QMEKD 258
Fly 259 ELIKVLNKEKMMAKMELEKLRNVKLTEEHHDNESHHIMPYEFEHMKGCLLKE---IGLKESLIAE 320
Fly 321 ITDKLH---------------DLRVENSELSEKLNLAG---------KRLLEYTDRIRFLESRVD 361
Fly 362 DLTRIVSSRDVMISSLESDKQELDKCLKEARDDLHNRIEVLNASSDLLDCSLSPNTTPENLASS- 425
Fly 426 ------VIDKQLRE-------KEHENAELKEKLLNLNNSQRELCQALSSFLQKHNIDHE--FPVE 475
Fly 476 WTSSSLLSTISAIESKFVNTLEKSTQMKKECDVQSVCVEKLLEKCKL-LSVSLGCQPKELDGFEA 539
Fly 540 TIPEAMESGFESSRECETILSCCHMKVVDIASKNNDL---------ELDNE---RLNDKCAELKS 592
Fly 593 IIDRGDQH----LADINLQ----LIEKEKQIKDVGAEIQELRKRNINLENMLSQIADKEASAASH 649
Fly 650 -AQHLK----QCGELLRAKYEVCRNELIAKNAAQDELVRMMMVPDGETLNGRVRQLIDLEMMH-- 707
Fly 708 --DEHNKMYAQ----MLKQLNELSAKH-DNMTHSHLDFVKRTEIELET----------------- 748
Fly 749 ------------KNAQIMAFDEHNNHFDRFLTRI-----FTLLRSRNCPKS--TTMGSATNFLES 794
Fly 795 MHIEKRFENIEMLIEGQLLSADDLKR---ELDDLRSK-----------NEELA--KQNINGIIKR 843
Fly 844 NKFITSLEVNTEKVKQYITDLEEEAFKRKQKVVQLENTLSKEQSNAKEMAQRLD-------IAQQ 901
Fly 902 EIKDYHVEAIRFINTIRDR-------LQQDFNGVNTPQQLGTCMTEFLKMYDQMEVRYEESSSLV 959
Fly 960 EKLTESQAKLEMQVAELQVELEN------KDTNQHSGALIKQ-------LNDTIQNLEKVNAKLS 1011
Fly 1012 EDNTVSHTVHSKLNESLLKAQKEL-----DLRAKIIENLEASERNLSMKLCELKDLKNKLKSSDE 1071
Fly 1072 KIAQIKETYEEQ---IKALQAKCDMEAKKNEHLERNQNQSLTQL-KEDALENCVLMSTKLEELQA 1132
Fly 1133 KLQEGQQLVDSQKL-------ELDMNRKELALVKSAYEAQTK-LSDDLQRQKESGQQLVDNLKVE 1189
Fly 1190 LEKERKEL-AHVNSAIGAQTKLSDDL-----ECQKES---GQQLVDNLKVELEKERKELAQVKSV 1245
Fly 1246 IEAQ-TKLSDDLQREKESAQQLVDNLKVELDKERKEL-AQVNSAFEAQTKLSDDLQRQKESA--- 1305
Fly 1306 QQLVDNLKVELDKE-------RKELAQVNSAFEAQTKLSDDLQREKESAQQLVDNLKV--ELDKE 1361
Fly 1362 RKEL-AQVKSVIEAQTKLSDDLQRQKESAQQLVDNLKVELDKERKE----LAKVKSVIEAQTKLS 1421
Fly 1422 DDLQRQKE----SAQQLEAQ-TKLSDDLQRQKESAQQLVDNLKVELDKERKELAQVKSVIEAQT- 1480
Fly 1481 ---KLSDDLQRQKESAQQLVDNLK---MELDKERKELAQVKSAIGAQTKLSDD-LECQKESVQQL 1538
Fly 1539 ---VDNLKVELEKERKELAKVNSAFEAQ----TKLSDDLKLQ-------KEDAQREVFLVKERL- 1588
Fly 1589 --VKEK-------------------REFEVKLATLEDIIETLE----------MRCTQM-----E 1617
Fly 1618 EE--------RATAYEQINKLENRCQEKD----NVKSSQLQVETFKVECLHHQLKSEM-ATHNSL 1669
Fly 1670 VED------LNRKLAEKVSKLDFVQSRLMTEIAEHNQ-VKDQLAQITDIPKVVELQHRLEAETAE 1727
Fly 1728 REEAQNKLAVVTGRLDEITRELDNARLEHGAQILRM-------EETAREVGNKNAELCELIEFYR 1785
Fly 1786 NRVEALERLLLASNQELEELNSIQSN--QAEGVRDLGDTYSAAEGRQTESDQDKERYQK----LA 1844
Fly 1845 LDCKILQAKYRDAKDEIKR-----CEKKIKDQRLEMEGK-LEKMKNKMRSLYT--AEVTRMKEKQ 1901
Fly 1902 ERDAAKSASELEALTAQNAKYEEHTRKLSNQI----------VRLNEKILEQQKQHAI-----IS 1951
Fly 1952 TNLRHLQ------MQPISETKPSSTTLTVSSSSSAPNDDWQPFKRPNVPSSNLAMEDEEGEVFNN 2010
Fly 2011 TYLTDLKLGRVPADMTAEELIYRNSLQPPHLKSTYAAQYDLGSQDEDLKDGPHSLDDSMSALLSS 2075
Fly 2076 SSTGTRKKSMGTHYKRPGPPTPSKNGGRL------SFGSSEPP-----REILREFGDHNNTSKTP 2129
Fly 2130 AR 2131 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
mud | NP_727769.3 | SMC_prok_B | 319..1178 | CDD:274008 | 215/1029 (21%) |
SCP-1 | 853..1571 | CDD:114219 | 188/809 (23%) | ||
Smc | 1234..>1944 | CDD:224117 | 189/843 (22%) | ||
DUF948 | 1392..1517 | CDD:295114 | 35/140 (25%) | ||
Golga4 | XP_036010996.1 | SMC_prok_B | 197..1046 | CDD:274008 | 183/900 (20%) |
Smc | 733..1532 | CDD:224117 | 179/828 (22%) | ||
Smc | <1501..2188 | CDD:224117 | 162/792 (20%) | ||
Grip | 2222..2265 | CDD:197860 | 7/26 (27%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |