DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment m and MATN4

DIOPT Version :9

Sequence 1:NP_572747.1 Gene:m / 44835 FlyBaseID:FBgn0002577 Length:682 Species:Drosophila melanogaster
Sequence 2:NP_001380459.1 Gene:MATN4 / 8785 HGNCID:6910 Length:581 Species:Homo sapiens


Alignment Length:527 Identity:110/527 - (20%)
Similarity:165/527 - (31%) Gaps:140/527 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 VHLTFSHPFEGIVSSKGQHSDPRCVYVPPSTGKTFFSFRISYSR--------------CGTKPDL 112
            |.|....|:|    ::.|.:.|||     .||.....|.|..||              .|....|
Human     9 VLLLLLQPWE----TQLQLTGPRC-----HTGPLDLVFVIDSSRSVRPFEFETMRQFLMGLLRGL 64

  Fly   113 N-GQFYENTVVVQYDKDLLEVWDEAKRLRCEWFNDYEKTASKPPMVIADL-DVIQLDFRGDNVDC 175
            | |.......|:||...:..|:......|.|   |.|:       .|.|| .:.|....|..:..
Human    65 NVGPNATRVGVIQYSSQVQSVFPLRAFSRRE---DMER-------AIRDLVPLAQGTMTGLAIQY 119

  Fly   176 WMEIQHGKGPWAPPVSGIVPLGSTLTLVVAINDYRGEFDMRVKSCVASDGSGHVINLSDEFGCVL 240
            .|.:.......|.|....||     .:.|.:.|  |....||.. ||:......|.:. ..| |.
Human   120 AMNVAFSVAEGARPPEERVP-----RVAVIVTD--GRPQDRVAE-VAAQARARGIEIY-AVG-VQ 174

  Fly   241 RPKMISRFLKARAP-DERATVI-TYAFFHAF--KFPDALSVHIKCKVEIC---RHGCLDHCQNTG 298
            |..:.|....|..| ||...:: ::.....|  :|...|     |.:::|   .|||..||.|  
Human   175 RADVGSLRAMASPPLDEHVFLVESFDLIQEFGLQFQSRL-----CAIDLCAEGTHGCEHHCVN-- 232

  Fly   299 VGGGGGGSGESLGLGLGLGLTNANERKDVHMSDALGSSSNDLLRDLALPPGGQ-------HGM-- 354
                   |..|......:|.....:::.....|.....::....:....|||.       |.:  
Human   233 -------SPGSYFCHCQVGFVLQQDQRSCRAIDYCSFGNHSCQHECVSTPGGPRCHCREGHDLQP 290

  Fly   355 --------GMGMGPDH---------DIFYEDIIHDHKQTLGGGGMPAGGDYGH---------EKS 393
                    .:..|.||         .:.|..:..:.:|....|........||         .||
Human   291 DGRSCQVRDLCNGVDHGCEFQCVSEGLSYRCLCPEGRQLQADGKSCNRCREGHVDLVLLVDGSKS 355

  Fly   394 VNLQPRPVHEEQEEADLSDLFGDEDLADLDMEGGEGERYLGL-----KKSGKFPHGPRQLEAQKR 453
            |    ||.:.|..:..::.:.   |..|:..||..    :||     :...:||.|.....|:.:
Human   356 V----RPQNFELVKRFVNQIV---DFLDVSPEGTR----VGLVQFSSRVRTEFPLGRYGTAAEVK 409

  Fly   454 MGV---------PMAG--PRSLEPHGHGDEDVPRPVYRPQAEALKQPREDHIDLDKEEEEE---- 503
            ..|         .|.|  .|.:..|...:....||      .||..||...:..|...:::    
Human   410 QAVLAVEYMERGTMTGLALRHMVEHSFSEAQGARP------RALNVPRVGLVFTDGRSQDDISVW 468

  Fly   504 --KEKEE 508
              :.|||
Human   469 AARAKEE 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mNP_572747.1 ZP 55..286 CDD:214579 56/243 (23%)
Zona_pellucida <194..287 CDD:278526 23/99 (23%)
MATN4NP_001380459.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X161
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.