DRSC/TRiP Functional Genomics Resources

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Protein Alignment m and matn1

DIOPT Version :9

Sequence 1:NP_572747.1 Gene:m / 44835 FlyBaseID:FBgn0002577 Length:682 Species:Drosophila melanogaster
Sequence 2:NP_001025613.1 Gene:matn1 / 595001 XenbaseID:XB-GENE-957559 Length:490 Species:Xenopus tropicalis


Alignment Length:296 Identity:58/296 - (19%)
Similarity:93/296 - (31%) Gaps:117/296 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 CGTKPDLNGQFYENTVVVQYDKDLLEVWDEAKRLRCEWFNDYEKTASKPPMVIADLDVIQLDFRG 170
            |.|:|                .|:|.:.|.::.:|...|...:...|:   |:..|||      |
 Frog    32 CRTRP----------------TDILFIIDSSRSVRPSEFEQVKVFLSQ---VVESLDV------G 71

  Fly   171 DNV--------------DCWMEIQHGKGPWAPPVSGIVPLGS-TLT-------LVVAINDYRGEF 213
            .|.              :..::....|......|..:.||.: |:|       :.:|..:..|  
 Frog    72 ANATRVGLVNYASTVKNEFSLKTHKAKPALLQAVKKVQPLSTGTMTGLAIQYAINIAFTEPEG-- 134

  Fly   214 DMRVKS-------CVASDGSGHVINLSDEFGCVLRPKMISRFLKARAP----------------- 254
             .|:||       .:.:||               ||:...:.:.|||.                 
 Frog   135 -ARLKSPGINKVAIIVTDG---------------RPQDAVKDISARARESGLEIYAIGVGRVDKN 183

  Fly   255 ----------DERATVI-TYAFFHAF--KFPDALSVHIKCKVEICRHGCLDH-CQNTGVGGGGGG 305
                      ||....: :|:.....  ||.:|..|    ..::|..|  || |:...|...|  
 Frog   184 TLRQIASEPLDEHVDYVESYSLIEKLSKKFQEAFCV----TADLCSTG--DHDCEQICVSTPG-- 240

  Fly   306 SGESLGLGLGLGLTNANERKDVHMSDALGSSSNDLL 341
               |.......|.| .||  |....:|.|:|:.||:
 Frog   241 ---SYTCACRDGFT-LNE--DGKTCNACGASAVDLV 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mNP_572747.1 ZP 55..286 CDD:214579 40/238 (17%)
Zona_pellucida <194..287 CDD:278526 23/137 (17%)
matn1NP_001025613.1 vWA_Matrilin 35..258 CDD:238752 51/279 (18%)
vWFA 265..489 CDD:381780 3/6 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X161
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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