DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment m and T01D1.8

DIOPT Version :9

Sequence 1:NP_572747.1 Gene:m / 44835 FlyBaseID:FBgn0002577 Length:682 Species:Drosophila melanogaster
Sequence 2:NP_001300591.1 Gene:T01D1.8 / 3896729 WormBaseID:WBGene00044641 Length:189 Species:Caenorhabditis elegans


Alignment Length:170 Identity:44/170 - (25%)
Similarity:61/170 - (35%) Gaps:58/170 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 DVIQLDF-RGDNVDCWMEIQHGKGPWAPPVSGIVPLGSTLTLVVAIND---------YRGE---- 212
            |:|:|.. |....:|...:.||..          .||..:|..|.|.|         |.|:    
 Worm    37 DIIELPVGRFPEPECKYSVHHGSD----------KLGRIVTSKVNIGDEIYHSWNCNYSGDHKNY 91

  Fly   213 -FDMRVKSCVASDGSG------HVINLSDEFGCVLRPKMISRFLKARAPDERATVITY------- 263
             |.:.|.:|..|| ||      ..|.:.||.||.:.|.::        ||     |:|       
 Worm    92 LFCVMVNNCTISD-SGEEEIGTRKIQIIDENGCSVFPNIL--------PD-----ISYQGDLSAG 142

  Fly   264 AFFHAFKFP-DALSVHIKCKVEICRHGCLDH--CQNTGVG 300
            ...|||... |..:||..|.:::.   ..||  ||....|
 Worm   143 IKVHAFALDVDTTAVHFTCNIKML---FKDHEQCQRPRCG 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mNP_572747.1 ZP 55..286 CDD:214579 39/152 (26%)
Zona_pellucida <194..287 CDD:278526 32/120 (27%)
T01D1.8NP_001300591.1 Zona_pellucida <39..179 CDD:391783 42/166 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.