DRSC/TRiP Functional Genomics Resources

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Protein Alignment m and Matn3

DIOPT Version :10

Sequence 1:NP_572747.1 Gene:m / 44835 FlyBaseID:FBgn0002577 Length:682 Species:Drosophila melanogaster
Sequence 2:NP_001382499.1 Gene:Matn3 / 313954 RGDID:1305085 Length:481 Species:Rattus norvegicus


Alignment Length:189 Identity:41/189 - (21%)
Similarity:59/189 - (31%) Gaps:69/189 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 AGNELWP--MERPDGMPNIVSLEVMCGK---DH-----------------------MDVHLTFSH 68
            :|.||:.  ::|.|    :.||::|..|   ||                       :|..:..:|
  Rat   208 SGIELYAVGVDRAD----MESLKMMASKPLEDHVFYVETYGVIEKLSARFQETFCALDQCMLGTH 268

  Fly    69 PFEGIVSSKG---QHSDPRCVYVPPSTGKTFFSFRISYSRCGTKP---------DLNGQF----Y 117
            ..:.:..|.|   .|.:....|...:.|||..:.    .:|....         |.||.:    |
  Rat   269 QCQHVCVSDGDGRHHCECSQGYTLNADGKTCSAI----DKCALNTHGCEQICVNDRNGSYHCECY 329

  Fly   118 E--------NTVVVQYDKDLLE--------VWDEAKRLRCEWFNDYEKTASKPPMVIAD 160
            |        .|...| ||..|.        |.|.|....||.|..|...|.|....:.|
  Rat   330 EGYTLNADRKTCAAQ-DKCALGTHGCQHICVNDGAGSHHCECFEGYTLNADKKTCSVRD 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mNP_572747.1 ZP 55..286 CDD:214579 33/164 (20%)
Matn3NP_001382499.1 vWFA 75..298 CDD:469594 18/93 (19%)
FXa_inhibition 305..341 CDD:464251 6/35 (17%)
FXa_inhibition 347..383 CDD:464251 10/35 (29%)
FXa_inhibition 389..425 CDD:464251
Matrilin_ccoil 438..478 CDD:463070
Blue background indicates that the domain is not in the aligned region.

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