DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment m and Matn3

DIOPT Version :9

Sequence 1:	NP_572747.1	Gene:	m / 44835	FlyBaseID:	FBgn0002577	Length:	682	Species:	Drosophila melanogaster
Sequence 2:	NP_001382499.1	Gene:	Matn3 / 313954	RGDID:	1305085	Length:	481	Species:	Rattus norvegicus

Alignment Length:	189	Identity:	41/189 - (21%)
Similarity:	59/189 - (31%)	Gaps:	69/189 - (36%)

- Green bases have known domain annotations that are detailed below.

  Fly    32 AGNELWP--MERPDGMPNIVSLEVMCGK---DH-----------------------MDVHLTFSH 68
            :|.||:.  ::|.|    :.||::|..|   ||                       :|..:..:|
  Rat   208 SGIELYAVGVDRAD----MESLKMMASKPLEDHVFYVETYGVIEKLSARFQETFCALDQCMLGTH 268

  Fly    69 PFEGIVSSKG---QHSDPRCVYVPPSTGKTFFSFRISYSRCGTKP---------DLNGQF----Y 117
            ..:.:..|.|   .|.:....|...:.|||..:.    .:|....         |.||.:    |
  Rat   269 QCQHVCVSDGDGRHHCECSQGYTLNADGKTCSAI----DKCALNTHGCEQICVNDRNGSYHCECY 329

  Fly   118 E--------NTVVVQYDKDLLE--------VWDEAKRLRCEWFNDYEKTASKPPMVIAD 160
            |        .|...| ||..|.        |.|.|....||.|..|...|.|....:.|
  Rat   330 EGYTLNADRKTCAAQ-DKCALGTHGCQHICVNDGAGSHHCECFEGYTLNADKKTCSVRD 387

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
m	NP_572747.1	ZP	55..286	CDD:214579	33/164 (20%)
m	NP_572747.1	Zona_pellucida	<194..287	CDD:278526
Matn3	NP_001382499.1	vWFA	75..298	CDD:412136	18/93 (19%)
		FXa_inhibition	305..341	CDD:405372	6/35 (17%)
		FXa_inhibition	347..383	CDD:405372	10/35 (29%)
		FXa_inhibition	389..425	CDD:405372
		Matrilin_ccoil	438..478	CDD:402147
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X161
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.000