DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment m and cutl-4

DIOPT Version :9

Sequence 1:NP_572747.1 Gene:m / 44835 FlyBaseID:FBgn0002577 Length:682 Species:Drosophila melanogaster
Sequence 2:NP_507484.3 Gene:cutl-4 / 189246 WormBaseID:WBGene00012304 Length:469 Species:Caenorhabditis elegans


Alignment Length:352 Identity:82/352 - (23%)
Similarity:132/352 - (37%) Gaps:62/352 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LWPMERPDGMPNIVS-----LEVMCGKDHMDVHLTFSHPFEGIVSSKGQHSDPRCVYVPPSTGKT 95
            ||...:...:|.|.:     .||:|....:.:.:..|..|.|.:.|||......|.....||..:
 Worm    12 LWSHIQSAKVPRIQNGIVGEPEVICDIKQIRITMRTSQSFIGNLYSKGFFHKSECRVRGNSTANS 76

  Fly    96 FFSFRISYSRCG--TKPDLN--GQFYENTVVVQYDKDLLEVWDEAKRLRCEWFNDYEKT------ 150
            ........|.||  .|..:|  |...:..|::.:....|...|.:..::|: :.:.|:|      
 Worm    77 IEIVLPVDSDCGIRRKRMMNPRGILLDTIVILMFHPVFLTQTDRSYHVQCQ-YTESERTVTNALD 140

  Fly   151 -----ASKPPMVIADLDVIQLDFRGDNVD-CWMEI--QHGKGPWAPPVSGIVPLGSTLTLVVAIN 207
                 ||:.|..|..|:       .|:.. |..|:  ::.:|   ||:|. ..:|..:....:.:
 Worm   141 VSMQPASELPQSIQQLN-------DDSAPVCKYEVLMENAQG---PPLSH-ATVGDLVYHKWSCD 194

  Fly   208 DYRGE-FDMRVKSCVASDGSGHVINLSDEFGCVLRPKMISRFLKARAPDERATVITYAFFHAFKF 271
            ....| :.|.|.|||..||.|....|.||.||.| ...|.:.|:....:..|..::    ..|||
 Worm   195 GNNKEMYCMTVHSCVVDDGQGFGQKLVDEHGCTL-DAFILKELEYNEKELEAGQMS----SVFKF 254

  Fly   272 PDALSVHIKCKV----------------EICRHGCLDHCQNTGVGGGGGGSGESLGLGLGLGLTN 320
            .|..:|...|.:                |:|::......||..|......| :.:..|......|
 Worm   255 ADKPTVFFSCMIRVEMKESAEMPCVIPTEVCKNLPSSKMQNLDVMTDRKVS-DDIPPGFPRPQNN 318

  Fly   321 ANERKDVHMS-DALGSSSN---DLLRD 343
            ...:|....| ||:.|:|:   |.|.|
 Worm   319 TKLQKSQKFSTDAMTSNSDYSADFLDD 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mNP_572747.1 ZP 55..286 CDD:214579 60/265 (23%)
Zona_pellucida <194..287 CDD:278526 26/109 (24%)
cutl-4NP_507484.3 ZP 35..278 CDD:214579 59/259 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X161
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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