DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment m and cutl-26

DIOPT Version :9

Sequence 1:NP_572747.1 Gene:m / 44835 FlyBaseID:FBgn0002577 Length:682 Species:Drosophila melanogaster
Sequence 2:NP_741299.2 Gene:cutl-26 / 176896 WormBaseID:WBGene00021950 Length:502 Species:Caenorhabditis elegans


Alignment Length:238 Identity:61/238 - (25%)
Similarity:97/238 - (40%) Gaps:26/238 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 CGKDHMDVHLTFSHPFEGIVSSKGQHSDPRCVYVPPSTGKTFFSFRISYSRCGTKPDLNGQFYEN 119
            |.:|.:.|.:..|.||||:|.::...|: .|......|........:....||.|.|:..:.|..
 Worm    33 CSEDVVSVFIRTSKPFEGLVQTRSSESE-ACRVQGFGTNVAVLKLNLKSDECGIKYDVASKTYSV 96

  Fly   120 TVVVQYDKDLLEVWDEAKRLRC-EWFNDYEKTASKPPMVIADLDVIQLDFRGDNVDCWMEIQHGK 183
            ||.|.....|:...|::..:.| |..|..:..||:.....:|..:..|..|.. ||   .:::.:
 Worm    97 TVDVHSHPVLIVEGDKSVNVTCREIANGTQHYASQMTSQSSDYQLRVLSSRLP-VD---TVKYSQ 157

  Fly   184 GPWAPPVSGIVPLGSTLTLVVAINDYRGEFDMRVKSCVASDGSGHV-INLSDEFGCVLRPKMISR 247
                |....|.||.||         .:..:...|..|:|....|:| :.|:|..||.|...::..
 Worm   158 ----PYTLQIRPLPST---------QQNSYSFFVGQCIAQPVGGNVTVQLTDPVGCALFKSIMGH 209

  Fly   248 FLKARAPDERATVITYAFFHAFKFPDALSVHIKCKVEICRHGC 290
            |.: |...|.|.:.:     .|:||:|..:.|.|.|..|...|
 Worm   210 FAR-RESVEEAEIPS-----MFRFPNAKQLKISCIVTECDGSC 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mNP_572747.1 ZP 55..286 CDD:214579 59/232 (25%)
Zona_pellucida <194..287 CDD:278526 25/93 (27%)
cutl-26NP_741299.2 Zona_pellucida 33..252 CDD:391783 61/238 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.