DRSC/TRiP Functional Genomics Resources

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Protein Alignment m and cut-3

DIOPT Version :9

Sequence 1:NP_572747.1 Gene:m / 44835 FlyBaseID:FBgn0002577 Length:682 Species:Drosophila melanogaster
Sequence 2:NP_495780.1 Gene:cut-3 / 174347 WormBaseID:WBGene00009041 Length:389 Species:Caenorhabditis elegans


Alignment Length:287 Identity:66/287 - (22%)
Similarity:110/287 - (38%) Gaps:55/287 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 FILHLMFSLVIAGNELWPME-RPDGMPNIVSLEVMCGKDHMDVHLTFSHPFEGIVSSKGQHSDPR 84
            :.|.|...|::|.....|:: ..:|.|     ||.||...:.|:....:.|||.|..||......
 Worm     4 YSLGLGLCLLVASVSAIPVDNNVEGEP-----EVECGPTSITVNFNTRNAFEGHVYVKGLFDQQE 63

  Fly    85 CVYVPPSTGKTFFSFRISYSRCGT--KPDLN--GQFYENTVVVQYDKDLLEVWDEAKRLRCEWFN 145
            |  .....|:......:.:..|..  ...||  |.|...||||.:....:...|.|.|::| ::.
 Worm    64 C--RNDEGGRQVAGIELPFDTCNVARTRSLNPKGVFVTTTVVVSFHPQFVTKVDRAYRVQC-FYM 125

  Fly   146 DYEKTASKPPMVIADL------DVIQLDFRGDNVDCWMEIQHGKGPWAPPVSGIVPLG------- 197
            :.:||.| ..:.::||      .|:.:..      |..||.:| ||...||. ...:|       
 Worm   126 EADKTVS-TQIEVSDLTTAFQTQVVPMPI------CKYEILNG-GPTGEPVQ-FATIGQQVYHKW 181

  Fly   198 ----STLTLVVAINDYRGEFDMRVKSCVASDGSGHVINLSDEFGCVLRPKMISRFLKARAPDERA 258
                .|:....|:          |.||...||:|..:.:.||.||.|...:::..      :...
 Worm   182 TCDSETVDTFCAV----------VHSCTVDDGNGDTVQILDENGCALDKFLLNNL------EYPT 230

  Fly   259 TVITYAFFHAFKFPDALSVHIKCKVEI 285
            .::.....|.:|:.|...:..:|::.|
 Worm   231 DLMAGQEAHVYKYADRSQLFYQCQISI 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mNP_572747.1 ZP 55..286 CDD:214579 57/252 (23%)
Zona_pellucida <194..287 CDD:278526 19/103 (18%)
cut-3NP_495780.1 ZP 33..272 CDD:214579 57/253 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 82 1.000 Domainoid score I5383
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X161
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

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