DRSC/TRiP Functional Genomics Resources

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Protein Alignment m and matn3

DIOPT Version :9

Sequence 1:NP_572747.1 Gene:m / 44835 FlyBaseID:FBgn0002577 Length:682 Species:Drosophila melanogaster
Sequence 2:XP_017949551.2 Gene:matn3 / 101731756 XenbaseID:XB-GENE-985172 Length:402 Species:Xenopus tropicalis


Alignment Length:303 Identity:57/303 - (18%)
Similarity:98/303 - (32%) Gaps:95/303 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 VIAGNELWPMERPDGMPNIVSLEVMCGKDHMDVHLTFSHPFEGIVSSKGQHSDPRCVYVPPSTGK 94
            ::.|:.:.|:.||                    .|..|.|:...|..|   .:|:.:.|...|.:
 Frog    41 IVYGSTVLPLSRP--------------------MLLNSPPYTTNVRYK---PEPKTLQVTQPTER 82

  Fly    95 TFFSFRISYSRCGTKPDLNGQFYENTVVVQYDKDLLEVWDEAKRLRCEWFNDYEKTASKPPMVIA 159
            .          |.::|                .||:.:.|.::.:|.:   ::||.......:|.
 Frog    83 A----------CKSRP----------------MDLVLIIDSSRSVRPQ---EFEKVKIFLSDMIE 118

  Fly   160 DLD-------VIQLDFRGD-NVDCWMEIQHGKGPWAPPVSGIVPLGS-TLT---LVVAINDY--- 209
            .||       |..:::... ..:.::............||.|.||.: |:|   :..||.:.   
 Frog   119 TLDTGEYATRVAVVNYASTVKTEFYLNTYFNNAEMKKAVSMISPLSTGTMTGLAIQTAIEEVFTE 183

  Fly   210 -----RGEFDMRVKSCVASDG-----------SGHVINLSDEFGCVLRPKMISRFLKARAP--DE 256
                 |....:...:.:.:||           ....:|:......|.|..|.|..|.|..|  |.
 Frog   184 KAGSRRAALGIPKVAIIVTDGRPQDRVQDVAARARAMNIEIYAVGVDRADMKSLRLMASEPLDDH 248

  Fly   257 RATVITYAFFH--AFKFPDALSVHIKCKVEIC---RHGCLDHC 294
            ...|.||....  ..||.::|     |.::.|   ||.|...|
 Frog   249 VFYVETYGVIEKLTLKFRESL-----CGIDACSMGRHDCEHIC 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mNP_572747.1 ZP 55..286 CDD:214579 48/265 (18%)
Zona_pellucida <194..287 CDD:278526 26/122 (21%)
matn3XP_017949551.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X161
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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