DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment m and col6a5

DIOPT Version :9

Sequence 1:NP_572747.1 Gene:m / 44835 FlyBaseID:FBgn0002577 Length:682 Species:Drosophila melanogaster
Sequence 2:XP_012820988.2 Gene:col6a5 / 100486063 XenbaseID:XB-GENE-6451494 Length:2771 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mNP_572747.1 ZP 55..286 CDD:214579
Zona_pellucida <194..287 CDD:278526
col6a5XP_012820988.2 vWFA 33..198 CDD:412136
VWA 237..410 CDD:395045
vWFA 431..590 CDD:412136
vWFA 632..797 CDD:412136
vWA_collagen 839..1000 CDD:238749
VWA 1026..1194 CDD:395045
VWA 1213..1385 CDD:395045
VWA 1404..1569 CDD:395045
Collagen 1835..1888 CDD:396114
Collagen 1868..1919 CDD:396114
Collagen 1929..1983 CDD:396114
Collagen 2013..2079 CDD:396114
Collagen 2072..2129 CDD:396114
VWA 2162..2307 CDD:395045
vWFA_subfamily_ECM 2366..2544 CDD:238727
Kunitz_BPTI 2649..2700 CDD:394972
KU 2717..2770 CDD:238057
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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