DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kto and SRB8

DIOPT Version :9

Sequence 1:NP_524786.1 Gene:kto / 44830 FlyBaseID:FBgn0001324 Length:2531 Species:Drosophila melanogaster
Sequence 2:NP_010004.1 Gene:SRB8 / 850442 SGDID:S000000677 Length:1427 Species:Saccharomyces cerevisiae


Alignment Length:775 Identity:134/775 - (17%)
Similarity:248/775 - (32%) Gaps:271/775 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 PDIYPQDAKQREDELTPTNVKHGFTTTPPLSDEF----GTAHNSNVNASKV-SAFFSGVLAKKEE 78
            ||..|.:....||::....|..||..||.::.|.    .:.|.|.|..|.: |..|..::..:|:
Yeast    31 PDFKPWEHTAAEDQILANFVAKGFYHTPMVNFESISARSSVHESLVTQSNILSQQFDKIIKIRED 95

  Fly    79 ---------LMTLPDTG-RKKQQINCKDNFWPVSPRRKCTVDAWFKDL-AGNKPLLSLAKRAPSF 132
                     ..||...| :...:|...|:       ||   :.|..:| :.:..|:.:.|..|..
Yeast    96 HINKIPSNSTTTLHGPGFQLPNRITLTDH-------RK---ETWLHELSSSHTSLVKIGKFIPHG 150

  Fly   133 NKKEEIFITLCENQVNMQRATWFIKLSAAYTLSFTESKNKKRSIYDPA---------AEWTGNMI 188
            .|:.::........:.::||.|.||  ..|.:.:..:..||||....|         .:||...:
Yeast   151 LKRRQVIEQCYLKFIPLKRAIWLIK--CCYFIEWKSNHKKKRSNAAGADDAISMHLLKDWTDTFV 213

  Fly   189 KFMKELLPKLQEYYQQNHDKSSSNGTTSGSLTAAGNGPASNGSTGTSSINSVTGSSASTNVIPVP 253
            ..:::|:     :...||                                               
Yeast   214 YILEKLI-----FDMTNH----------------------------------------------- 226

  Fly   254 SMASPLPPIHSPANGQQAAPGGGVNAGSVMPTTGSLGGVVGGPGSSVVGGAAGAGAAVPPGSTIS 318
                                                                             
Yeast   227 ----------------------------------------------------------------- 226

  Fly   319 GIGSQFEDSRNALKYWKYCHQLSKYM------YEESLLDRQEFLNWILDLLDKMRTQASFDEPLK 377
                 :.||:. |:.||  .|:|.::      |...|::::.|.:|:::.::||.   :|:  ..
Yeast   227 -----YNDSQQ-LRTWK--RQISYFLKLLGNCYSLRLINKEIFHHWLVEFINKME---NFE--FL 278

  Fly   378 KLVLSFALQYMHDFVQSERLCRKMAYIVSKK------LAQLLNTVVEQQTIKELDEPKLQQDPYE 436
            .|.|...:.:.:|..|.:......|.|.|.:      :.::.:.::.:..|....:..:..:.|.
Yeast   279 PLSLHILMIFWNDICQIDTNAPVAATITSSQKEPFFLVTKITDMLLHKYYIVSSSKSMINDENYI 343

  Fly   437 LALQEQMSCPHHRDIVLYLSTILQIITIECPTALVWSGIAAHRAPSSLLGSPLDHLPLAPSVLPM 501
            :           .||.......|.|:.|                .|||:........|...:.  
Yeast   344 I-----------NDIKKNNKIKLNILKI----------------LSSLILKIFQEQSLEVFIF-- 379

  Fly   502 PTRCPRTNHEIRRQL---------RAAESDIVLRTQHAEQRWFAAKWLSAGKNQYTSVLATLDHL 557
                |.:|.||.:.|         ....||:..:.:....|..:.|..|:.:|...|.....|..
Yeast   380 ----PTSNWEIYKPLLFEIVSNADTNQNSDMKKKLELISYRNESLKNNSSIRNVIMSASNANDFQ 440

  Fly   558 DT--HC--FDRME--HNNSIDTLYAQIF-PSPTVSRRREEDQVEPRPPYEPKQDKDTVRI--LCE 613
            .|  .|  |.::.  ..|.|||.:.::. .:||     |.|.    |.|..:......:|  |..
Yeast   441 LTIVTCKQFPKLSCIQLNCIDTQFTKLLDDNPT-----EFDW----PTYVDQNPLTMHKIIQLIL 496

  Fly   614 WAVSGQRWGEH---RAMVVAILLDKRQIDVTSTPADQQSSDKDDKDSLASGAGLIDGLPVFQHVL 675
            |::...|..:|   ..:|..:||    :.:.||  |:...:...:|::.|        .|||   
Yeast   497 WSIHPSRQFDHYESNQLVAKLLL----LRINST--DEDLHEFQIEDAIWS--------LVFQ--- 544

  Fly   676 MHFLDHDAPVLDEHVSSPQQRTEF--TNLVQLFSALIRHDVFSHNAYMHTLISRGDLLLE 733
                      |.::.|:.::...:  .:|.:|.:.||.:.:.....|:..|||.|.|.|:
Yeast   545 ----------LAKNFSAQKRVVSYMMPSLYRLLNILITYGIIKVPTYIRKLISSGLLYLQ 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ktoNP_524786.1 Med12 99..157 CDD:286572 11/58 (19%)
Med12-LCEWAV 390..856 CDD:288959 71/373 (19%)
SRB8NP_010004.1 Med12 113..175 CDD:401449 13/71 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR46007
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.100

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