DRSC/TRiP Functional Genomics Resources

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Protein Alignment g and AT5G49900

DIOPT Version :10

Sequence 1:NP_524785.2 Gene:g / 44819 FlyBaseID:FBgn0001087 Length:1034 Species:Drosophila melanogaster
Sequence 2:NP_199801.2 Gene:AT5G49900 / 835053 AraportID:AT5G49900 Length:957 Species:Arabidopsis thaliana


Alignment Length:677 Identity:124/677 - (18%)
Similarity:205/677 - (30%) Gaps:264/677 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 RYPEALRPAFPKLKEKLEDPDPGVQSAAVNVICELARKNPKNYLPLAPIFFKLMTTSTNNWML-- 239
            :|...|.|..|||.:  :|.:.|:.|...|:     :.:...|..|.|          .:|.:  
plant   143 KYSSVLCPRNPKLDK--QDSESGIGSWDWNL-----KGDKSTYHALYP----------RSWTMYE 190

  Fly   240 ------IKIIKLFGALTPLEPRLGKKLIEP-------LTNLIHSTSAMSLLYECINTVIAVLISI 291
                  ::|:  ...::|..|...|:...|       |.||.::|:.::||:...|:| ......
plant   191 GEPDPELRIV--CRQVSPFIPHNYKESSFPVSVFTFTLHNLGNTTADVTLLFTWANSV-GGDSEF 252

  Fly   292 SSGMPNHSASIQLCVQKLRILIEDSDQNLKYLGLLAMSKILKTHPKSVQAHKDL-ILAC----LD 351
            |.|..|...::...||  .:|:.....|    ||.::|..:     |.||...: :.||    :.
plant   253 SGGHYNSKITMNDGVQ--GVLLHHKTAN----GLPSLSYAI-----SAQATDGVSVSACPFFIVS 306

  Fly   352 DKDESIRLRALDLLYGMVSKKNLMEIVKR--LLGHMERAEGSAYRD------------------- 395
            .|.:.|            :.|::.:.||.  ...|::.:|.|...|                   
plant   307 GKQDGI------------TAKDMWQAVKENGSFDHLKASEASMQSDHGSSIGAAVAASVTVLPGE 359

  Fly   396 ------ELLYKVIEICAQSSYLY---VTNF----------------------------------- 416
                  .|.:...|:...|..:|   .|.|                                   
plant   360 SRIVTFSLAWDCPEVQFPSGKIYSRRYTKFYGNNGDAAAQIAHDAILGHSQWESWIEDWQRPILE 424

  Fly   417 -----EWY-LTVLVELIQLEAG------------------SRHGRLIAEQL-LDVAIRVPVVRQF 456
                 .|| :|:..||..|.:|                  .:...|...|| |...|.||.....
plant   425 DKRLPAWYPVTLFNELYYLNSGGTLWTDGSSPVHSLAGVREKKFSLDKSQLGLKNDIDVPHQNDT 489

  Fly   457 AVN---EMTNLLDTFTVSAQSNSMYEVLYAAAWIVGEFAGELEDAEKTLNILLRPRLLPGHIQGV 518
            ||:   :|.:.|:....|..|||.:....            ||:.|:.:          ||.  :
plant   490 AVSVLEKMASTLEELHASTTSNSAFGTKL------------LEEGEENI----------GHF--L 530

  Fly   519 YVQNV---------IKLFARLATTCLELQDLPGLVTLCDHVLDKLQHFNGSSDIEVQERANSACM 574
            |::.:         :..:|..|...|    .|.|                  ::.:|....:|.|
plant   531 YLEGIEYRMWNTYDVHFYASFALVML----FPKL------------------ELSIQRDFAAAVM 573

  Fly   575 LIEMLRNQLSTSTDAMAMDTTTEGGIPPLAIEIVQEMTLLFTGELIPVAPKAQRKV--PLPDGLD 637
            |           .|...:.|.:||                         ...||||  .:|..|.
plant   574 L-----------HDPTKVKTLSEG-------------------------QWVQRKVLGAVPHDLG 602

  Fly   638 L-DEWINAPPPEDAASSSSSEHDKD--ELFVSATQAGTGADGGEKRRQSLELTPEQLERQRMAR- 698
            : |.|...    :..:..:::..||  ..||........|. |:|:..|.......:....||: 
plant   603 INDPWFEV----NGYTLHNTDRWKDLNPKFVLQVYRDVVAT-GDKKFASAVWPSVYVAMAYMAQF 662

  Fly   699 ------LIEQSNNPHYLKSTPTASGAS 719
                  :||....|.....|.:|||.|
plant   663 DKDGDGMIENEGFPDQTYDTWSASGVS 689

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gNP_524785.2 Adaptin_N 33..578 CDD:396262 94/522 (18%)
AP3D1 687..840 CDD:461889 10/40 (25%)
AT5G49900NP_199801.2 Glyco_hydr_116N 93..411 CDD:463496 57/310 (18%)
DUF608 527..888 CDD:461391 42/228 (18%)

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