DRSC/TRiP Functional Genomics Resources

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Protein Alignment g and alpha-ADR

DIOPT Version :10

Sequence 1:NP_524785.2 Gene:g / 44819 FlyBaseID:FBgn0001087 Length:1034 Species:Drosophila melanogaster
Sequence 2:NP_197669.1 Gene:alpha-ADR / 832340 AraportID:AT5G22770 Length:1012 Species:Arabidopsis thaliana


Alignment Length:788 Identity:183/788 - (23%)
Similarity:325/788 - (41%) Gaps:164/788 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 KNLTDLVRGIRN--NKDNEAKYISTCIEEIKQELRQDNISV---KCNAVAKLTYIQMLGYDISWA 76
            :.|:..:..:||  ||:.|...:...:..|:...:.:.:..   |...|.|:.||.|||||:.:.
plant     5 RGLSVFISDVRNCQNKEAERLRVDKELGNIRTCFKNEKVLTPYKKKKYVWKMLYIHMLGYDVDFG 69

  Fly    77 GFNIIEVMSSSRFTCKRIGYLAASQCFHPDSELLMLTTNMIRKDLNSQNQYDAGVALSGLSCFIS 141
            ....:.::|:.::..|::||:..|...:.:.:.|.|..|.:|.|:..:|:....:||:.:.....
plant    70 HMEAVSLISAPKYPEKQVGYIVTSCLLNENHDFLKLAINTVRNDIIGRNETFQCLALTLVGNIGG 134

  Fly   142 PDLSRDLANDIMTLM--SSTKPYLRMKAVLMMYKVFLRYPEALRPA--FPKLKEKLEDPDPGVQS 202
            .|.:..||.|:..|:  ||.:|.:|.||.|.:.::|.:.|:|:...  ..::.:.|::.|.||.:
plant   135 RDFAESLAPDVQKLLISSSCRPLVRKKAALCLLRLFRKNPDAVNVDGWADRMAQLLDERDLGVLT 199

  Fly   203 AAVNVICELARKNPKNYLPLAPIFFKLMTTSTNN---------------WMLIKIIKLFGALTPL 252
            ::.:::..|...|.:.|....|...|::.....|               |:.:|.::.......:
plant   200 SSTSLLVALVSNNHEAYSSCLPKCVKILERLARNQDVPQEYTYYGIPSPWLQVKAMRALQYFPTI 264

  Fly   253 E-PRLGKKLIEPLTNLIHSTSAM----------SLLYECINTVIAVLISISSGMPNHSASIQLCV 306
            | |...|.|.|.|..::..|..:          ::|:|.::.|:        .:......:..||
plant   265 EDPSTRKALFEVLQRILMGTDVVKNVNKNNASHAVLFEALSLVM--------HLDAEKEMMSQCV 321

  Fly   307 QKLRILIEDSDQNLKYLGLLAMSKILKTHPKS--VQAHKDLILACLDDKDESIRLRALDLLYGMV 369
            ..|...|...:.|::||||..|:::|......  ::.|:..|:..|.|.|.|||.|||||||||.
plant   322 ALLGKFISVREPNIRYLGLENMTRMLMVTDVQDIIKKHQSQIITSLKDPDISIRRRALDLLYGMC 386

  Fly   370 SKKNLMEIVKRLLGHMERAEGSAYRDELLYKVIEICAQSSYLYVTNFEWYLTVLVELIQLEAGSR 434
            ...|..:||:.||.::..||.| .|:||..|. .|.|:.   :..:..||:.|:::||     .:
plant   387 DVSNAKDIVEELLQYLSTAEFS-MREELSLKA-AILAEK---FAPDLSWYVDVILQLI-----DK 441

  Fly   435 HGRLIAEQLLDVAIRV-------PVVRQFAVNEMTNLLDTFTVSAQSNSMYEVLYAAAWIVGEFA 492
            .|..:::   |:..||       ..::.:|.::....||...:   ..:|.:|   :|:|:||:.
plant   442 AGDFVSD---DIWFRVVQFVTNNEDLQPYAASKAREYLDKIAI---HETMVKV---SAYILGEYG 497

  Fly   493 GELE-----DAEKTLNILLRPRLLPGHIQGVYVQNVIKLFARLATTCLELQDLPGLVTLCDHVLD 552
            ..|.     .|.:..:||  ...|| .|....:..::..:|:|.     :...|....|...|..
plant   498 HLLARQPGCSASELFSIL--HEKLP-TISTPTIPILLSTYAKLL-----MHAQPPDPELQKKVWA 554

  Fly   553 KLQHFNGSSDIEVQERA---------NSACM--LIEM---------------------------L 579
            ..:.:....|:|:|:||         ..|.|  |.||                           |
plant   555 VFKKYESCIDVEIQQRAVEYFELSKKGPAFMDVLAEMPKFPERQSSLIKKAENVEDTADQSAIKL 619

  Fly   580 RNQLSTSTDAMAMD-TTTEGGIPPLAIEIVQEMT--------LLF-TGELIPVAPKAQRKVPLPD 634
            |.|...|...:..| ....|..|||.:.|:...|        |.. .|.|..:.|    :.|.||
plant   620 RAQQQPSNAMVLADQQPVNGAPPPLKVPILSGSTDPESVARSLSHPNGTLSNIDP----QTPSPD 680

  Fly   635 GL-DL--DEWINAPPPEDAASSSSSEHDKDELFVSATQAGTGADGGEKRRQSLELTPEQLERQRM 696
            .| ||  ...|.|||    .:.|:.:|           ...||:|          .|::::...:
plant   681 LLSDLLGPLAIEAPP----GAVSNEQH-----------GPVGAEG----------VPDEVDGSAI 720

  Fly   697 ARLIEQSN 704
            ..:.||:|
plant   721 VPVEEQTN 728

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gNP_524785.2 Adaptin_N 33..578 CDD:396262 142/602 (24%)
AP3D1 687..840 CDD:461889 4/18 (22%)
alpha-ADRNP_197669.1 Adaptin_N 23..582 CDD:396262 139/593 (23%)
HEAT repeat 323..347 CDD:293787 8/23 (35%)
HEAT repeat 359..387 CDD:293787 17/27 (63%)
HEAT repeat 397..427 CDD:293787 11/34 (32%)
Alpha_adaptinC2 751..844 CDD:197886
Alpha_adaptin_C 856..965 CDD:426707
Blue background indicates that the domain is not in the aligned region.

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