DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment g and AT3G24180

DIOPT Version :10

Sequence 1:NP_524785.2 Gene:g / 44819 FlyBaseID:FBgn0001087 Length:1034 Species:Drosophila melanogaster
Sequence 2:NP_189060.2 Gene:AT3G24180 / 822004 AraportID:AT3G24180 Length:950 Species:Arabidopsis thaliana


Alignment Length:348 Identity:70/348 - (20%)
Similarity:108/348 - (31%) Gaps:142/348 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   601 PPLA--------IEIVQEMTLLFT----------------------GELIPV--------APKAQ 627
            ||.|        ..|::|.|:.|.                      |...|:        .|.|.
plant    36 PPHAWRRRLNCHANILKEFTITFREAIKMVRLGIRLWSYVREEASHGRKAPIDPFTKENCKPSAS 100

  Fly   628 RKVPLPDGL-----------DLDEWINAPPPEDAASSSSSEHDKDELFVSATQAGTGADGGEKRR 681
            :.||| .|:           :..:|...|...|.:...|::.   .:|:|       .|||.|:.
plant   101 QGVPL-GGMGSGSISRGFRGEFKQWQITPGTCDPSPMMSNQF---SIFIS-------RDGGHKKY 154

  Fly   682 QSLELTPEQ---LERQRMARLIEQSNNPHYLKST-----PTASGASNADQYDNIDDIPITELPLD 738
            .|: |:|.|   |.:.|...|.....|.:...||     |.|        :...|..|..||.:.
plant   155 ASV-LSPGQHGSLGKSRDKGLSSWGWNLNGQHSTYHALFPRA--------WTIYDGEPDPELKIS 210

  Fly   739 MEGV--------------AALRV------------------------GITKRSDKYLQEQQAAQG 765
            ...:              ||:.|                        |.:..|..::.|....:.
plant   211 CRQISPFIPNNYRDSSLPAAVFVYTLVNTGKERAKVSLLFTWANSMGGTSHMSGGHVNEPFIGED 275

  Fly   766 SKDG-KKKHKKGKKSKKAKNKVAYNSSSESEGEPKPLHIVNTTLDMPEGVS---------MSDSE 820
            ...| ...||.||.:......:|   :||::.       ||.|:....|:|         |.|:.
plant   276 GVSGVLLHHKTGKGNPPVTFAIA---ASETQN-------VNVTVLPCFGLSEDSSFTAKDMWDTM 330

  Fly   821 DKDGKYD-------PNDPHRALD 836
            ::|||:|       |:.|..|.|
plant   331 EQDGKFDQENFNSGPSTPSLAGD 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gNP_524785.2 Adaptin_N 33..578 CDD:396262
AP3D1 687..840 CDD:461889 43/213 (20%)
AT3G24180NP_189060.2 Glyco_hydr_116N 102..421 CDD:463496 59/282 (21%)
DUF608 535..896 CDD:461391
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.