DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment g and GBA2

DIOPT Version :9

Sequence 1:NP_524785.2 Gene:g / 44819 FlyBaseID:FBgn0001087 Length:1034 Species:Drosophila melanogaster
Sequence 2:XP_006716872.1 Gene:GBA2 / 57704 HGNCID:18986 Length:933 Species:Homo sapiens


Alignment Length:100 Identity:26/100 - (26%)
Similarity:40/100 - (40%) Gaps:30/100 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   434 RHGRLIAEQLLDVAIRVPVVRQFAVNEMTNLLDTFTVSAQSNSMYEVLYAAAWIVGEFAGELEDA 498
            |.|:.:.:|:|.:. |..|:|.:    ...|...|       :.|..||..||.|.:..|:    
Human   202 REGQTVYQQVLSLE-RPSVLRSW----NWGLCGYF-------AFYHALYPRAWTVYQLPGQ---- 250

  Fly   499 EKTLNILLRPR----LLPGHIQ------GVYVQNV 523
                |:.|..|    :||...|      ||:|.:|
Human   251 ----NVTLTCRQITPILPHDYQDSSLPVGVFVWDV 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gNP_524785.2 Adaptin_N 33..578 CDD:279882 25/99 (25%)
HEAT repeat 152..173 CDD:293787
HEAT repeat 185..213 CDD:293787
Cnd1 <193..266 CDD:289487
HEAT repeat 221..263 CDD:293787
HEAT repeat 272..290 CDD:293787
HEAT repeat 302..331 CDD:293787
BLVR 687..840 CDD:283923
GBA2XP_006716872.1 GBA2_N 166..461 CDD:289023 25/99 (25%)
DUF608 527..890 CDD:282531
GDE_C <625..>753 CDD:283786
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG4354
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.