DRSC/TRiP Functional Genomics Resources

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Protein Alignment g and ap3d1

DIOPT Version :9

Sequence 1:NP_524785.2 Gene:g / 44819 FlyBaseID:FBgn0001087 Length:1034 Species:Drosophila melanogaster
Sequence 2:XP_009294538.1 Gene:ap3d1 / 563359 ZFINID:ZDB-GENE-050208-437 Length:1270 Species:Danio rerio


Alignment Length:1067 Identity:579/1067 - (54%)
Similarity:729/1067 - (68%) Gaps:135/1067 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALKKVKGNFFERMFDKNLTDLVRGIRNNKDNEAKYISTCIEEIKQELRQDNISVKCNAVAKLTY 65
            ||||.|||: .:|||||||.||||||||:|::|||||||||:||||||:||||:||.|||.||||
Zfish     1 MALKIVKGS-IDRMFDKNLQDLVRGIRNHKEDEAKYISTCIDEIKQELKQDNIAVKANAVCKLTY 64

  Fly    66 IQMLGYDISWAGFNIIEVMSSSRFTCKRIGYLAASQCFHPDSELLMLTTNMIRKDLNSQNQYDAG 130
            :||||||:|||.|||:||||||:||.|||||||||||||..::::|||||.|||||:|.||||.|
Zfish    65 LQMLGYDVSWAAFNIVEVMSSSKFTYKRIGYLAASQCFHEGTDVIMLTTNQIRKDLSSPNQYDTG 129

  Fly   131 VALSGLSCFISPDLSRDLANDIMTLMSSTKPYLRMKAVLMMYKVFLRYPEALRPAFPKLKEKLED 195
            |||:|||||::|||:||||||||||||.||||:|.||||:||||||:|||:||||||:|||||||
Zfish   130 VALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPESLRPAFPRLKEKLED 194

  Fly   196 PDPGVQSAAVNVICELARKNPKNYLPLAPIFFKLMTTSTNNWMLIKIIKLFGALTPLEPRLGKKL 260
            ||||||||||||||||||:||||||.|||:||||||:|||||:||||||||||||||||||||||
Zfish   195 PDPGVQSAAVNVICELARRNPKNYLSLAPLFFKLMTSSTNNWVLIKIIKLFGALTPLEPRLGKKL 259

  Fly   261 IEPLTNLIHSTSAMSLLYECINTVIAVLISISSGMPNHSASIQLCVQKLRILIEDSDQN------ 319
            ||||||||||||||||||||:|||||||||:||||||||||||||||||||||||||||      
Zfish   260 IEPLTNLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHSASIQLCVQKLRILIEDSDQNCEPSVN 324

  Fly   320 --LKYLGLLAMSKILKTHPKSVQAHKDLILACLDDKDESIRLRALDLLYGMVSKKNLMEIVKRLL 382
              :||||||||||||||||||||:||||||.|||||||||||||||||||||||||||||||:|:
Zfish   325 ACMKYLGLLAMSKILKTHPKSVQSHKDLILQCLDDKDESIRLRALDLLYGMVSKKNLMEIVKKLM 389

  Fly   383 GHMERAEGSAYRDELLYKVIEICAQSSYLYVTNFEWYLTVLVELIQLEAGSRHGRLIAEQLLDVA 447
            .|:::|||:.||||||.|:|:||:||:|.|:||||||:::||||.:|| |:|||.|||.|:||||
Zfish   390 LHVDKAEGTTYRDELLTKIIDICSQSNYQYITNFEWYISILVELTRLE-GTRHGHLIASQMLDVA 453

  Fly   448 IRVPVVRQFAVNEMTNLLDT---FTVSAQSNSMYEVLYAAAWIVGEFAGELEDAEKTLNILLRPR 509
            |||..:|.|||.:|..|||.   .|.:.|.|.:.|||||||||.||||..|||...||..:|||:
Zfish   454 IRVKAIRAFAVAQMATLLDNAHLLTGNTQRNGICEVLYAAAWICGEFAEHLEDPMLTLEAMLRPK 518

  Fly   510 L--LPGHIQGVYVQNVIKLFARL------ATTCLELQDLPGLVTLCDHVLDKLQHFNGSSDIEVQ 566
            :  ||||||.|||||..||||.:      .|.....|:...|      ::|:|..|..|:::|||
Zfish   519 VATLPGHIQAVYVQNAAKLFATVLQKHEGETDSQAAQETSQL------LIDRLPLFVQSANLEVQ 577

  Fly   567 ERANSACMLIEMLRNQLSTSTDAMAMDTTTEGGIPPLAIEIVQEMTLLFTGELIPVAPKAQRKVP 631
            |||:....|::.::.                  :....:|:.:|:|.||.|||.|||||||:|||
Zfish   578 ERASCILQLVKYIQK------------------LQQKNVEVAEEVTALFAGELNPVAPKAQKKVP 624

  Fly   632 LPDGLDLDEWINAPPPEDAASSSSSEHDKDELFVSATQAGTGADGGEKRRQSLELTPEQLERQRM 696
            :|:|||||.|||.||     |.|.||.:|.:...:..:.      ...|.:..|:..::|.|:|.
Zfish   625 IPEGLDLDAWINEPP-----SESESEDEKPKAVFAKEEP------KHSRSRHTEVDEKELARRRE 678

  Fly   697 ARLIEQSNNPHYLKSTPTASGASNADQYD--NIDDIPITELPLDMEGVAALRVGITKRSDKY--L 757
            ||..||:|||.|:|::|     |:...||  .::.||:.::.|.:    .|:|.....||:|  |
Zfish   679 ARKQEQANNPFYIKASP-----SSQKVYDAPGVEHIPVVQIDLSV----PLKVPGMPMSDQYVKL 734

  Fly   758 QEQQAAQGSKDGKKKHKKGKKSKKAKNKVAYNSSSESEGEPKPLHIVN-TTLDMPEGVSMSDSED 821
            :|::..:...|.|||.||.|:.|:.|.:.. :|..|||.:..|.|.|: .|.:|||....||.:|
Zfish   735 EEERRQKEKADKKKKEKKKKREKRGKGRKG-DSGPESEEDITPAHHVDIVTEEMPENALPSDDDD 798

  Fly   822 KDGKYDPNDPHRALDIELD----------ITEFEAPAVRS----ASKKSAADKENLKTPADSAGG 872
            |    ||||||:||||:||          :.:.|...||:    ..|..|.|:::...|.::...
Zfish   799 K----DPNDPHKALDIDLDNLLSGAGSRPLADSEKLPVRTHRPEVLKSPAEDRDDNTIPQETKKK 859

  Fly   873 GNAAKKDRKKDKDKDKER-----KVKREHRESKRERKEAAVQSVI---------------DLIDA 917
            .:..||::||||:||::|     |.|::|::.:.|..|:..:.|:               |..|.
Zfish   860 SSKDKKEKKKDKEKDRKRSKEDKKKKKKHKDVEEELPESLPEEVVQSEETKEVAVPPTSADASDL 924

  Fly   918 D-----TPTPSPSHISATSNNNNTSTVLPDAPKHHKKKKNKEKTTDEAPDALATATGSSIIDVGG 977
            |     .|.|..:.:...|::...:||  |:......:...|:..|..||               
Zfish   925 DFWLSSAPVPPVAQVVTVSSSAAAATV--DSSSAAAAESEPEELKDTEPD--------------- 972

  Fly   978 EEASEVASKVHKKKHKKEKSQRKEKKK 1004
                :..|..||||.:|::.:.|||||
Zfish   973 ----DTKSSKHKKKKQKKEKEEKEKKK 995

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gNP_524785.2 Adaptin_N 33..578 CDD:279882 412/563 (73%)
HEAT repeat 152..173 CDD:293787 16/20 (80%)
HEAT repeat 185..213 CDD:293787 26/27 (96%)
Cnd1 <193..266 CDD:289487 67/72 (93%)
HEAT repeat 221..263 CDD:293787 37/41 (90%)
HEAT repeat 272..290 CDD:293787 16/17 (94%)
HEAT repeat 302..331 CDD:293787 27/36 (75%)
BLVR 687..840 CDD:283923 60/157 (38%)
ap3d1XP_009294538.1 Adaptin_N 32..588 CDD:279882 412/562 (73%)
HEAT repeat 151..172 CDD:293787 16/20 (80%)
Cnd1 155..265 CDD:289487 97/109 (89%)
HEAT repeat 185..209 CDD:293787 22/23 (96%)
HEAT repeat 221..250 CDD:293787 25/28 (89%)
HEAT repeat 258..293 CDD:293787 32/34 (94%)
HEAT repeat 302..332 CDD:293787 20/29 (69%)
HEAT repeat 343..372 CDD:293787 26/28 (93%)
BLVR 669..813 CDD:283923 60/157 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170587099
Domainoid 1 1.000 808 1.000 Domainoid score I72
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1032 1.000 Inparanoid score I268
OMA 1 1.010 - - QHG52588
OrthoDB 1 1.010 - - D163216at33208
OrthoFinder 1 1.000 - - FOG0005167
OrthoInspector 1 1.000 - - oto41390
orthoMCL 1 0.900 - - OOG6_102126
Panther 1 1.100 - - LDO PTHR22781
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R64
SonicParanoid 1 1.000 - - X3686
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1312.940

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