DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment g and ap1g1

DIOPT Version :9

Sequence 1:NP_524785.2 Gene:g / 44819 FlyBaseID:FBgn0001087 Length:1034 Species:Drosophila melanogaster
Sequence 2:XP_017212304.1 Gene:ap1g1 / 324466 ZFINID:ZDB-GENE-030131-3187 Length:822 Species:Danio rerio


Alignment Length:859 Identity:197/859 - (22%)
Similarity:350/859 - (40%) Gaps:190/859 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LTDLVRGIR--NNKDNEAKYISTCIEEIKQELRQDNISVKCNAVAKLTYIQMLGYDISWAGFNII 81
            |.:|:|.||  ..:..|.:.|......|:...|:::.:.:|..||||.|:.||||...:.....:
Zfish     7 LRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECL 71

  Fly    82 EVMSSSRFTCKRIGYLAASQCFHPDSELLMLTTNMIRKDLNSQNQYDAGVALSGLSCFISPDLSR 146
            ::::|.:||.||||||.|........::.:|.||.|:.|||...||..|:||..|.|..|.::.|
Zfish    72 KLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCR 136

  Fly   147 DLANDIMTLMSSTKPYLRMKAVLMMYKVFLRYPEALRPAFPKLKEKLEDPDPGVQSAAVNVICEL 211
            |||.::..|:.::..|||.||.|....|..:.||.:....|..|..|.:.:.||...:|.::.|:
Zfish   137 DLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLSEKNHGVLHTSVVLLTEM 201

  Fly   212 A----------RKNPKNYLPLAPIFFKLMTTS----------TNNWMLIKIIKLFGALTPLEPRL 256
            .          |||.|....|..|...|:.:.          ::.::.::|::|...|...:...
Zfish   202 CERSPDMLSHFRKNEKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGKGDDDS 266

  Fly   257 GKKLIEPLTNLIHSTSAM-----SLLYECINTVIAVLISISSGMPNHSASIQLCVQKLRILIEDS 316
            .:.:.:.|..:..:|...     ::|||.:.|::.  |...||:.      .|.:..|...:.::
Zfish   267 SEAMNDILAQVATNTETSKNVGNAILYETVLTIMD--IKSESGLR------VLAINILGRFLLNN 323

  Fly   317 DQNLKYLGLLAMSKILKTHPKSVQAHKDLILACLDDKDESIRLRALDLLYGMVSKKNLMEIVKRL 381
            |:|::|:.|.::.|.::|...:||.|:..|:.||.|.|.||:.||::|.:.:|:..|:..::|.|
Zfish   324 DKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNIRGMMKEL 388

  Fly   382 LGHMERAEGSAYRDELLYKVIEICAQSSYL----YVTNFEWYLTVLVELIQLEAGSRHGRLIAEQ 442
            |..::..:.....|         ||...:|    |..:..|::..::.:: ..|||         
Zfish   389 LYFLDSCDPEFKAD---------CASGIFLAAEKYAPSKRWHIDTIMRVL-TTAGS--------- 434

  Fly   443 LLDVAIRVPVVRQFAVNEMTNLLDTFTVSAQSNS-----MYEVL----------YAAAWIVGEF- 491
                     .||.   :.:.||:...|.|.:.::     :|:.|          ..|:|.:||: 
Zfish   435 ---------YVRD---DSVPNLIQLITNSVEMHAYTVQRLYKALLDDISQQPLVQVASWCIGEYG 487

  Fly   492 ----AGELEDAE-------KTLNILLRPRLLPGHIQGVYVQNV---------IKLFARLATTCLE 536
                :|:.|:.|       :.|::|          :|:.|.|:         :....:|:|....
Zfish   488 DLLVSGQCEEEEPIQVSEDEVLDVL----------EGLLVSNLSAPVTRGYSLTAIMKLSTRFSS 542

  Fly   537 LQDLPGLVTLCDHVLDKLQHFNGSSDIEVQERA---NSACMLIEMLRN----------------- 581
            :..:..:|::          :..|.|:|:|:||   |:.....:.:|.                 
Zfish   543 VNRIKKVVSI----------YGSSIDVELQQRAVEYNALFKKYDHMRPALLERMPIMEKSATNGP 597

  Fly   582 ----QLSTSTDAMAMDTTTEGGIPPLAIEIVQEMTLLFTGELIPVAPKAQRKVPLPDGLDLDEWI 642
                |.:..|||..:||.....||....:....:.||...:::||........|...|.:|.:.:
Zfish   598 AEIVQTNGETDAPILDTKHPPNIPQPISQANDLLDLLGGNDVVPVIQTTAPTKPASAGGELLDLL 662

  Fly   643 ------NAPPPEDAASSSSSEH-------DKDELFVSATQAGTG---ADGGEKRRQSLELTPEQL 691
                  ..|.|..|.|...|:.       ....||   ...|.|   .....|....:|.|    
Zfish   663 GDLSLTGGPAPTPAPSVPMSQPPFLLDGLTSQPLF---NDIGAGIPPMTAYNKNGLKIEFT---- 720

  Fly   692 ERQRMARLIEQSN-NPHYLKSTPTASGASNADQYDNIDD--IPIT-ELPL---DMEGVAALRVGI 749
                    .|:|| ||:....|..|:..:..|..:.:..  :|.| :|.|   ....|.||..|.
Zfish   721 --------FERSNPNPNIAVITIHATNTTEVDMTEFVFQAAVPKTFQLQLLSPSSNVVPALNQGS 777

  Fly   750 TKRSDKYL--QEQQ 761
            ..:..:.|  |:||
Zfish   778 VTQVIRVLNPQKQQ 791

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gNP_524785.2 Adaptin_N 33..578 CDD:279882 144/612 (24%)
HEAT repeat 152..173 CDD:293787 7/20 (35%)
HEAT repeat 185..213 CDD:293787 7/37 (19%)
Cnd1 <193..266 CDD:289487 16/92 (17%)
HEAT repeat 221..263 CDD:293787 6/51 (12%)
HEAT repeat 272..290 CDD:293787 4/22 (18%)
HEAT repeat 302..331 CDD:293787 6/28 (21%)
BLVR 687..840 CDD:283923 21/84 (25%)
ap1g1XP_017212304.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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