DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment g and Ap1g2

DIOPT Version :9

Sequence 1:NP_524785.2 Gene:g / 44819 FlyBaseID:FBgn0001087 Length:1034 Species:Drosophila melanogaster
Sequence 2:NP_031481.2 Gene:Ap1g2 / 11766 MGIID:1328307 Length:791 Species:Mus musculus


Alignment Length:845 Identity:195/845 - (23%)
Similarity:342/845 - (40%) Gaps:196/845 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LTDLVRGIRNNKD--NEAKYISTCIEEIKQELRQDNISVKCNAVAKLTYIQMLGYDISWAGFNII 81
            |.||:..||..|.  .|.:.|.....:|:...|..:...:...:|||.|:.||||...:.....:
Mouse     8 LQDLIEEIRGAKTQAQEREVIQKECAQIRASFRDGDPLQRHRQLAKLLYVHMLGYPAHFGQMECL 72

  Fly    82 EVMSSSRFTCKRIGYLAASQCFHPDSELLMLTTNMIRKDLNSQNQYDAGVALSGLSCFISPDLSR 146
            ::::|.|||.||:|||.|........:..:|.||.|:.||:..||...|:||..||...|.::.|
Mouse    73 KLIASPRFTDKRVGYLGAMLLLDERHDSHLLITNSIKNDLSQGNQPVQGLALCTLSTMGSAEMCR 137

  Fly   147 DLANDIMTLMSSTKPYLRMKAVLMMYKVFLRYPEALRPAFPKLKEKLEDPDPGVQSAAVNVICEL 211
            |||.::..|:....||:|.||:|....:..:.||......|...:.|.:...|:|...|.:|.||
Mouse   138 DLAPEVEKLLLQPSPYVRKKAILTAVHMIRKDPELSGIFLPPCTKLLRERHHGIQLGTVTLITEL 202

  Fly   212 ARKNP------KNYLP-LAPIFFKLMTT--STNN--------WMLIKIIKLFGAL----TPLEPR 255
            ..:||      :..:| |..|...|:||  ||.:        ::.::|::|...|    ......
Mouse   203 CERNPAALRHFRKVVPQLVQILRTLVTTGYSTEHSISGVSDPFLQVQILRLLRILGRNHEESSET 267

  Fly   256 LGKKLIEPLTNLIHSTSA-MSLLYECINTVIAVLISISSGMPNHSAS--IQLCVQKLRILIEDSD 317
            :...|.:..||...|.:| .::|.|.:.|::|:          |||:  ..|.|..|...:.::|
Mouse   268 MNDLLAQVATNTDTSRNAGNAVLLETVLTIMAI----------HSAAGLRVLAVNILGRFLLNND 322

  Fly   318 QNLKYLGLLAMSKILKTHPKSVQAHKDLILACLDDKDESIRLRALDLLYGMVSKKNLMEIVKRLL 382
            :|::|:.|.::.:::::...:||.|:..::.||.:.|.|:..|||:|...:|:..|:..:::.|.
Mouse   323 KNIRYVALTSLLQLVQSDHSAVQRHRSTVVECLQETDASLSRRALELSLALVNSSNVRAMMQELQ 387

  Fly   383 GHMERAEGSAYRDELLYKVIEICAQSSYLYVTNF----EWYLTVLVELIQLEAGSRHGRLIAEQL 443
            ..:|........|         ||....|....|    .|::..::.:: ..||:.         
Mouse   388 AFLESCPPDLRAD---------CASGILLAAERFAPSKRWHIDTILHVL-TTAGAH--------- 433

  Fly   444 LDVAIRVPVVRQFAVNEMTNL------LDTFTVS------AQSNSMYEVLYAAAWIVGEFA---- 492
                     ||..||..:|.|      |.|::|.      |:..|...::..|||.:||:.    
Mouse   434 ---------VRDDAVANLTQLIGEAEELHTYSVRRLYSALAEDISQQPLVQVAAWCIGEYGDLLL 489

  Fly   493 -GELEDAE----KTLNIL-LRPRLLPGHI-----QGVYVQNVIKLFARLATTCLELQDLPGLVTL 546
             |..|:.|    :..::| |..::|..|:     :|..:..::||..||......::.:..:...
Mouse   490 EGNCEETEPFQVEEEDVLALLEKVLQSHMSLPATRGYAITALMKLSTRLRGDNNRIRQVVSIYGS 554

  Fly   547 CDHVLDKLQHFNGSSDIEVQERA---NSACMLIEMLRNQL-------------------STSTDA 589
            |             .|:|:|:||   |:.....:.:|..:                   ...|:|
Mouse   555 C-------------VDLELQQRAVEYNTLFQKYDHMRAAILEKMPLVERGDPHVKEGGKEKQTEA 606

  Fly   590 MAMDTTTEGGIPPLAIEIVQEMTLL--------------------FTGELI-----------PVA 623
            ..::.|......|.|.:::..:.||                    ..||.:           |.|
Mouse   607 QPLEVTAPAPTEPQATKLLDLLDLLGDTSEPLSSGHAQHLPPQTPSPGEALIHLLDLPCTPPPPA 671

  Fly   624 PKAQRKVPLPDGLDLDEWINAP--PPE----DAASSSSSEHDKDELFVSAT---------QAGTG 673
            |....:|...:||.||.....|  .|.    .|.:::||:.|.......|.         ||.:|
Mouse   672 PIPSVRVFEREGLQLDLSFMRPLETPALLLVTATTTNSSKEDVTHFVCQAAVPKSFQLQLQAPSG 736

  Fly   674 ----ADGGEKRRQSLELTPEQLERQRMARLIEQSNNPHYLK--STPTASGASNADQYDNIDDIPI 732
                |.||      |.:|       ::.|::..:..|..||  .|...||....:.:: :|::|:
Mouse   737 NTIPAQGG------LPIT-------QVFRILNPNQAPLRLKLRLTYNHSGQPVQEIFE-VDNLPV 787

  Fly   733  732
            Mouse   788  787

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gNP_524785.2 Adaptin_N 33..578 CDD:279882 147/602 (24%)
HEAT repeat 152..173 CDD:293787 7/20 (35%)
HEAT repeat 185..213 CDD:293787 8/27 (30%)
Cnd1 <193..266 CDD:289487 21/93 (23%)
HEAT repeat 221..263 CDD:293787 12/56 (21%)
HEAT repeat 272..290 CDD:293787 5/18 (28%)
HEAT repeat 302..331 CDD:293787 7/28 (25%)
BLVR 687..840 CDD:283923 10/48 (21%)
Ap1g2NP_031481.2 Adaptin_N 24..575 CDD:279882 147/601 (24%)
Alpha_adaptinC2 678..786 CDD:197886 28/121 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG4354
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.