DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment for and prkg1b

DIOPT Version :9

Sequence 1:NP_477487.1 Gene:for / 44817 FlyBaseID:FBgn0000721 Length:1088 Species:Drosophila melanogaster
Sequence 2:XP_009304717.2 Gene:prkg1b / 566430 ZFINID:ZDB-GENE-080225-40 Length:684 Species:Danio rerio


Alignment Length:704 Identity:429/704 - (60%)
Similarity:532/704 - (75%) Gaps:33/704 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   387 QEERFIQIIQAKELKIQEMQRALQFKDNEIAELKSHLDKFQSVFPFSRGSAAGCAGTGGASGSGA 451
            ||:  |:.::.::..|.|::..|..||..|.:|::.|||::||.                     
Zfish    12 QEK--IEELRQRDALIDELELELDQKDELIQKLQNELDKYRSVI--------------------- 53

  Fly   452 GGSGGSGPGTATGATRKSGQNFQRQRALGISAEPQSESSLLLEHVSFPKYDKDERSRELIKAAIL 516
                  .|.|.....:.:.|..||.:...|||||.:.....|.||:.|.|.|..:|:||||.|||
Zfish    54 ------RPATQQVHKQSALQEHQRTKRQAISAEPTAFDIQDLSHVTLPFYPKSPQSKELIKEAIL 112

  Fly   517 DNDFMKNLDLTQIREIVDCMYPVKYPAKNLIIKEGDVGSIVYVMEDGRVEVSREGKYLSTLSGAK 581
            ||||||||:|:||:|||||||||:|..::.|||||||||:|||||||:|||::||..|.|:...|
Zfish   113 DNDFMKNLELSQIQEIVDCMYPVEYDKESCIIKEGDVGSLVYVMEDGKVEVTKEGMKLCTMGPGK 177

  Fly   582 VLGELAILYNCQRTATITAITECNLWAIERQCFQTIMMRTGLIRQAEYSDFLKSVPIFKDLAEDT 646
            |.|||||||||.||||:..:|...||||:||||||||||||||:.|||.:||||||.|:.|.|:.
Zfish   178 VFGELAILYNCTRTATVQTLTNVKLWAIDRQCFQTIMMRTGLIKHAEYMEFLKSVPTFQGLQEEI 242

  Fly   647 LIKISDVLEETHYQRGDYIVRQGARGDTFFIISKGKVRVTIKQQDTQEEKFIRMLGKGDFFGEKA 711
            |.|::||||||||..|:||:|||||||||||||||||.||.:........::|.|||||:|||||
Zfish   243 LSKLADVLEETHYSDGEYIIRQGARGDTFFIISKGKVNVTREDAPNGTPVYLRALGKGDWFGEKA 307

  Fly   712 LQGDDLRTANIICESADGVSCLVIDRETFNQLISNLDEIKHR-YDDEGAMERRKI-NEEFRDINL 774
            |||:|:||||:|  :|:.|:|||||||:|..||..||::.:: |||.||..:.:. |..|.::.|
Zfish   308 LQGEDIRTANVI--AAEAVTCLVIDRESFKHLIGGLDDVSNKGYDDAGAKAKYEAENAFFSNLKL 370

  Fly   775 TDLRVIATLGVGGFGRVELVQTNGDSSRSFALKQMKKSQIVETRQQQHIMSEKEIMGEANCQFIV 839
            .|..:|.||||||||||||||...:.:::||:|.:||..||:||||:||.|||:||.||:..|||
Zfish   371 VDFNIIDTLGVGGFGRVELVQLKSEETKTFAMKILKKRHIVDTRQQEHIRSEKQIMQEAHSDFIV 435

  Fly   840 KLFKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDSTTRFYTACVVEAFDYLHSRNIIYRDLKP 904
            :|::||||.||||||||:||||||||||||:|:|:|||||||||||||||.||||:.||||||||
Zfish   436 RLYRTFKDSKYLYMLMEACLGGELWTILRDRGSFEDSTTRFYTACVVEAFAYLHSKGIIYRDLKP 500

  Fly   905 ENLLLNERGYVKLVDFGFAKKLQTGRKTWTFCGTPEYVAPEVILNRGHDISADYWSLGVLMFELL 969
            |||:|:.|||.||||||||||:..|:|||||||||||||||:|||:||||||||||||:||:|||
Zfish   501 ENLILDHRGYAKLVDFGFAKKIGFGKKTWTFCGTPEYVAPEIILNKGHDISADYWSLGILMYELL 565

  Fly   970 TGTPPFTGSDPMRTYNIILKGIDAIEFPRNITRNASNLIKKLCRDNPAERLGYQRGGISEIQKHK 1034
            ||:|||:|.|||:||||||:|||.||||:.||:||.|||||||||||:||||..:.|:.:|||||
Zfish   566 TGSPPFSGPDPMKTYNIILRGIDMIEFPKKITKNAGNLIKKLCRDNPSERLGNLKNGVKDIQKHK 630

  Fly  1035 WFDGFYWWGLQNCTLEPPIKPAVKSVVDTTNFDDYPPDPEGPPPDDVTGWDKDF 1088
            ||:||.|.||:..||.|||.|.|.|..||:|||.:|.|.|.|||||.:|||.||
Zfish   631 WFEGFNWEGLRKGTLIPPIIPDVASPTDTSNFDSFPEDNEDPPPDDNSGWDTDF 684

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
forNP_477487.1 DD_cGKI-alpha 385..432 CDD:213374 15/44 (34%)
Crp 518..>627 CDD:223736 77/108 (71%)
CAP_ED 520..629 CDD:237999 76/108 (70%)
Crp 632..>753 CDD:223736 75/120 (63%)
CAP_ED 638..754 CDD:237999 69/116 (59%)
S_TKc 778..1036 CDD:214567 192/257 (75%)
STKc_cGK 783..1043 CDD:270724 195/259 (75%)
prkg1bXP_009304717.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 425 1.000 Domainoid score I596
eggNOG 1 0.900 - - E1_COG0664
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 861 1.000 Inparanoid score I409
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D123183at33208
OrthoFinder 1 1.000 - - FOG0001832
OrthoInspector 1 1.000 - - otm25209
orthoMCL 1 0.900 - - OOG6_100630
Panther 1 1.100 - - LDO PTHR24353
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2508
SonicParanoid 1 1.000 - - X815
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.860

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