DRSC/TRiP Functional Genomics Resources

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Protein Alignment for and pnpla6

DIOPT Version :9

Sequence 1:NP_477487.1 Gene:for / 44817 FlyBaseID:FBgn0000721 Length:1088 Species:Drosophila melanogaster
Sequence 2:XP_005160109.1 Gene:pnpla6 / 560986 ZFINID:ZDB-GENE-050107-4 Length:1343 Species:Danio rerio


Alignment Length:622 Identity:114/622 - (18%)
Similarity:217/622 - (34%) Gaps:179/622 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   244 PAPPTHS-----DVLT-HTLIYGTPPSGAQQLN---------------QDPRSLLHQQELQLQQR 287
            |....||     ||:| |...|.|..:.|.:::               :.|.||:...:: :..|
Zfish   234 PGDSVHSLLSILDVITGHQRPYKTVSARAAEVSTVLRLPVDAFLSIFEKYPESLVRVVQI-IMVR 297

  Fly   288 YQQLQQLQAQTQGLYTSQGSPVLYHQPSPGSSQPVAIPGATCHSPTQLQPP-NTLNLQQQMQSLR 351
            .|::..|....   |....:.:..|:..|.|| |:: |..|..||.:.... .:|.:..:.:...
Zfish   298 LQRVTVLALHN---YLGLTNELFSHEMQPRSS-PLS-PHPTRSSPVRHSKRFGSLTVPDKHREAA 357

  Fly   352 ISGCT--PSGTGGSATPSPVGLVDPNFIVSNYVAASPQEERFIQIIQAKELKIQEMQRALQFKDN 414
            :...|  ..|..|...|:          :|..:              :..:.|..||::|: .|.
Zfish   358 VQNATGGDHGKEGGTIPT----------LSRTI--------------SMPVDIAGMQKSLR-SDF 397

  Fly   415 EIAELKSHLDKFQSVFPFSRGSAAGCAGTGGASGSGAGGSGGSGPGTATGATRKSGQNFQRQRAL 479
            ::|              :.||..:..|..|                 ....|::     ||:|.:
Zfish   398 DMA--------------YERGRISVSAEDG-----------------VPAFTKE-----QRERKV 426

  Fly   480 -------GISAEPQSESSLLLEHVSFPKYDK-------DERSRELIKAAILDNDFMKNLDLTQIR 530
                   |:...|:.||.:.:    |..:..       :|..:|:::...:::..:.|..:|   
Zfish   427 TVDEVPSGVYLYPEEESGMDI----FSSFQGRPNATVFEEAQKEILRLMKIEDPSLLNGRVT--- 484

  Fly   531 EIVDCMYPVKYPAKNLIIKEGDVGSIVYVMEDGRVEV------SREGKYLSTLSGAKVLGELAIL 589
                 .:..|  |.:::.::||....::.:..|.:.|      .:|...|......:::|:||:|
Zfish   485 -----FHHAK--AGSVLARQGDQDVSLHFVLSGCLHVYQKMIDKQEAVCLFVTQPGEMVGQLAVL 542

  Fly   590 YNCQRTATITAITECNLWAIERQCFQTIMMRTGLIRQAEYSDFLKSVP-IFKDLAEDTLIKISDV 653
            .......||.|         ||.|  |.:.    |.::|:.:.::..| :....|....|::|..
Zfish   543 TGEPLIFTIKA---------ERDC--TFLK----ISKSEFYEIMREQPSVVLSAAHTVAIRMSAF 592

  Fly   654 LEETHY-------QRGDYIVRQGARGDTFFIISKGKVRVTIKQQDTQEEKFIRMLGKGDFFGEKA 711
            :.:..:       :.|..:.||..:.|..:|:..|::|..|::.:.::| .:...|:||..|...
Zfish   593 VRQMDFAIDWMAVEAGRALYRQDDQSDCTYIVLNGRLRSVIRKANGKKE-LVGEYGRGDLIGVVE 656

  Fly   712 LQGDDLRTANIICESADGVSCLVIDRETFNQLISNLDEIKHRYDDEGAMERRKINEEFRDINLTD 776
            ......|...:..         |.|.|........|:.||.||..                  ..
Zfish   657 ALTRQPRATTVHA---------VRDTELVKLPEGTLNNIKRRYPQ------------------VV 694

  Fly   777 LRVIATLGVGGFGRVELVQTNGD-SSRSFALKQMKKS 812
            .|:|..||....|.::  |..|. ||.:..|..|..|
Zfish   695 TRLIHLLGQKILGNLQ--QPRGPFSSSALGLPSMASS 729

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
forNP_477487.1 DD_cGKI-alpha 385..432 CDD:213374 6/46 (13%)
Crp 518..>627 CDD:223736 22/114 (19%)
CAP_ED 520..629 CDD:237999 22/114 (19%)
Crp 632..>753 CDD:223736 24/128 (19%)
CAP_ED 638..754 CDD:237999 23/122 (19%)
S_TKc 778..1036 CDD:214567 12/36 (33%)
STKc_cGK 783..1043 CDD:270724 10/31 (32%)
pnpla6XP_005160109.1 TM_EGFR-like 31..64 CDD:213052
Crp 164..>302 CDD:223736 15/68 (22%)
CAP_ED 170..291 CDD:237999 13/56 (23%)
Crp 466..>596 CDD:223736 28/154 (18%)
CAP_ED 467..577 CDD:237999 24/134 (18%)
CAP_ED 590..698 CDD:237999 24/135 (18%)
Crp 605..>706 CDD:223736 26/128 (20%)
Pat_PNPLA6_PNPLA7 921..1226 CDD:132864
RssA 926..1216 CDD:224666
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0664
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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