DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment for and Prkg1

DIOPT Version :9

Sequence 1:NP_477487.1 Gene:for / 44817 FlyBaseID:FBgn0000721 Length:1088 Species:Drosophila melanogaster
Sequence 2:NP_001099201.3 Gene:Prkg1 / 54286 RGDID:1587390 Length:671 Species:Rattus norvegicus


Alignment Length:708 Identity:431/708 - (60%)
Similarity:535/708 - (75%) Gaps:42/708 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   385 SPQEERFIQIIQAKELKIQEMQRALQFKDNEIAELKSHLDKFQSVFPFSRGSAAGCAGTGGASGS 449
            |..||.|.:|:..||.:|:|:::.|..|:.||.|||..|.|.|||.|.                 
  Rat     2 SELEEDFAKILMLKEERIKELEKRLSEKEEEIQELKRKLHKCQSVLPV----------------- 49

  Fly   450 GAGGSGGSGPGTATGATRKSGQNFQRQRALGISAEPQSESSLLLEHVSFPKYDKDERSRELIKAA 514
                     |.|..|.        :..||.|||||||:..|......:|.|:.|.|||::|||.|
  Rat    50 ---------PSTHIGP--------RTTRAQGISAEPQTYRSFHDLRQAFRKFTKSERSKDLIKEA 97

  Fly   515 ILDNDFMKNLDLTQIREIVDCMYPVKYPAKNLIIKEGDVGSIVYVMEDGRVEVSREGKYLSTLSG 579
            ||||||||||:|:||:|||||||||:|...:.|||||||||:|||||||:|||::||..|.|:..
  Rat    98 ILDNDFMKNLELSQIQEIVDCMYPVEYGKDSCIIKEGDVGSLVYVMEDGKVEVTKEGVKLCTMGP 162

  Fly   580 AKVLGELAILYNCQRTATITAITECNLWAIERQCFQTIMMRTGLIRQAEYSDFLKSVPIFKDLAE 644
            .||.|||||||||.||||:..:....||||:||||||||||||||:..||.:||||||.|:.|.:
  Rat   163 GKVFGELAILYNCTRTATVKTLVNVKLWAIDRQCFQTIMMRTGLIKHTEYMEFLKSVPTFQSLPD 227

  Fly   645 DTLIKISDVLEETHYQRGDYIVRQGARGDTFFIISKGKVRVTIKQQDTQEEKFIRMLGKGDFFGE 709
            :.|.|::||||||||:.|:||:|||||||||||||||||.||.:...:::..|:|.|||||:|||
  Rat   228 EILSKLADVLEETHYENGEYIIRQGARGDTFFIISKGKVNVTREDSPSEDPVFLRTLGKGDWFGE 292

  Fly   710 KALQGDDLRTANIICESADGVSCLVIDRETFNQLISNLDEIKHR-YDDEGAMERRKINEE---FR 770
            |||||:|:||||:|  :|:.|:||||||::|..||..||::.:: |:|  |..:.|...|   |.
  Rat   293 KALQGEDVRTANVI--AAEAVTCLVIDRDSFKHLIGGLDDVSNKAYED--AEAKAKYEAEAAFFA 353

  Fly   771 DINLTDLRVIATLGVGGFGRVELVQTNGDSSRSFALKQMKKSQIVETRQQQHIMSEKEIMGEANC 835
            ::.|:|..:|.||||||||||||||...:.|::||:|.:||..||:||||:||.|||:||..|:.
  Rat   354 NLKLSDFNIIDTLGVGGFGRVELVQLKSEESKTFAMKILKKRHIVDTRQQEHIRSEKQIMQGAHS 418

  Fly   836 QFIVKLFKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDSTTRFYTACVVEAFDYLHSRNIIYR 900
            .|||:|::||||.||||||||:||||||||||||:|:|:|||||||||||||||.||||:.||||
  Rat   419 DFIVRLYRTFKDSKYLYMLMEACLGGELWTILRDRGSFEDSTTRFYTACVVEAFAYLHSKGIIYR 483

  Fly   901 DLKPENLLLNERGYVKLVDFGFAKKLQTGRKTWTFCGTPEYVAPEVILNRGHDISADYWSLGVLM 965
            |||||||:|:.|||.||||||||||:..|:|||||||||||||||:|||:||||||||||||:||
  Rat   484 DLKPENLILDHRGYAKLVDFGFAKKIGFGKKTWTFCGTPEYVAPEIILNKGHDISADYWSLGILM 548

  Fly   966 FELLTGTPPFTGSDPMRTYNIILKGIDAIEFPRNITRNASNLIKKLCRDNPAERLGYQRGGISEI 1030
            :|||||:|||:|.|||:||||||:|||.||||:.|.:||:|||||||||||:||||..:.|:.:|
  Rat   549 YELLTGSPPFSGPDPMKTYNIILRGIDMIEFPKKIAKNAANLIKKLCRDNPSERLGNLKNGVKDI 613

  Fly  1031 QKHKWFDGFYWWGLQNCTLEPPIKPAVKSVVDTTNFDDYPPDPEGPPPDDVTGWDKDF 1088
            ||||||:||.|.||:..||.|||.|:|.|..||:|||.:|.|.:.|||||.:|||.||
  Rat   614 QKHKWFEGFNWEGLRKGTLTPPIIPSVASPTDTSNFDSFPEDSDEPPPDDNSGWDIDF 671

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
forNP_477487.1 DD_cGKI-alpha 385..432 CDD:213374 21/46 (46%)
Crp 518..>627 CDD:223736 76/108 (70%)
CAP_ED 520..629 CDD:237999 74/108 (69%)
Crp 632..>753 CDD:223736 74/120 (62%)
CAP_ED 638..754 CDD:237999 68/116 (59%)
S_TKc 778..1036 CDD:214567 191/257 (74%)
STKc_cGK 783..1043 CDD:270724 194/259 (75%)
Prkg1NP_001099201.3 DD_cGKI-alpha 2..49 CDD:213374 21/46 (46%)
CAP_ED 103..212 CDD:237999 74/108 (69%)
CAP_ED 222..326 CDD:237999 65/105 (62%)
STKc_cGK 366..626 CDD:270724 194/259 (75%)
S_TK_X 621..>664 CDD:214529 24/42 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H55964
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D123183at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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