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Protein Alignment for and Prkacb

DIOPT Version :9

Sequence 1:	NP_477487.1	Gene:	for / 44817	FlyBaseID:	FBgn0000721	Length:	1088	Species:	Drosophila melanogaster
Sequence 2:	XP_006233513.1	Gene:	Prkacb / 293508	RGDID:	1310574	Length:	398	Species:	Rattus norvegicus

Alignment Length:	353	Identity:	132/353 - (37%)
Similarity:	205/353 - (58%)	Gaps:	40/353 - (11%)

- Green bases have known domain annotations that are detailed below.

  Fly   752 HRY------DDEGAMERR--------------------KINEEF---------RDINLTDLRVIA 781
            ||:      |.:.|:|..                    |..|:|         .:..|.|.....
  Rat    31 HRHSKGTAQDQKAALEEEGLQASEHTASWDKPMKEFLAKAKEDFLRKWENPPPSNAGLEDFERKK 95

  Fly   782 TLGVGGFGRVELVQTNGDSSRSFALKQMKKSQIVETRQQQHIMSEKEIMGEANCQFIVKLFKTFK 846
            |||.|.||||.||:... :.:.:|:|.:.|.::|:.:|.:|.::||.|:......|:|:|..:||
  Rat    96 TLGTGSFGRVMLVKHKA-TEQYYAMKILDKQKVVKLKQIEHTLNEKRILQAVEFPFLVRLEYSFK 159

  Fly   847 DKKYLYMLMESCLGGELWTILRDKGNFDDSTTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLNE 911
            |...|||:||...|||:::.||..|.|.:...|||.|.:|..|:||||.::|||||||||||::.
  Rat   160 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDH 224

  Fly   912 RGYVKLVDFGFAKKLQTGRKTWTFCGTPEYVAPEVILNRGHDISADYWSLGVLMFELLTGTPPFT 976
            :||:::.||||||::: || |||.||||||:|||:||::|::.:.|:|:||||::|:..|.|||.
  Rat   225 QGYIQVTDFGFAKRVK-GR-TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 287

  Fly   977 GSDPMRTYNIILKGIDAIEFPRNITRNASNLIKKLCRDNPAERLGYQRGGISEIQKHKWFDGFYW 1041
            ...|::.|..|:.|  .:.||.:.:.:..:|::.|.:.:..:|.|..:.|:|:|:.||||....|
  Rat   288 ADQPIQIYEKIVSG--KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVSDIKTHKWFATTDW 350

  Fly  1042 WGLQNCTLEPPIKPAVKSVVDTTNFDDY 1069
            ..:....:|.|..|..:...||:|||||
  Rat   351 IAIYQRKVEAPFIPKFRGSGDTSNFDDY 378

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.