DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(bx) and Acf

DIOPT Version :9

Sequence 1:NP_001261188.1 Gene:E(bx) / 44811 FlyBaseID:FBgn0000541 Length:2761 Species:Drosophila melanogaster
Sequence 2:NP_536734.2 Gene:Acf / 43751 FlyBaseID:FBgn0027620 Length:1476 Species:Drosophila melanogaster


Alignment Length:1856 Identity:334/1856 - (17%)
Similarity:605/1856 - (32%) Gaps:585/1856 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  1053 LLQDWEHARAHAVPFSDSLLTECILVDQECVT-NTKIKQEVNASSGCNTTPDSNTQDSDKID-YI 1115
            :.:|:||...| |...:|.:.:|....:|.:| ...:|.|..|..              |:: :.
  Fly    36 IFRDYEHYFRH-VMVINSTVWQCEATGKENLTYEEAVKSERAARK--------------KMEQFK 85

  Fly  1116 ESMDVCSNVEIESTEDSIVTGLNSGNAEDVDMTPGWRRKR-------NQKSKKSYIGTKDVLDQT 1173
            :|:.....:.:|..:.|.|..||.       :...:.|||       :.::||:  .|..||...
  Fly    86 QSLRAPVLLVVEHAQQSAVNTLNM-------IVAKFLRKRYFIGEEVSVQAKKN--ATYTVLGVK 141

  Fly  1174 LDKDIPLNKQNRRFPITARPVKRECVKKYERETFENGNERVYSTSSPRGRVYLLNDAAKLYEQAV 1238
            |||::|            .|:         ...:|:.:..||.....:|                
  Fly   142 LDKNMP------------EPL---------NGIYEDTDNLVYRLRPNKG---------------- 169

  Fly  1239 KTEDKSTITKKPSYSRYPLISNFLTHKKKRSLLVLPRFELLKLARLGGKSSTNGFHHAAKNNTIW 1303
                      .||                 :.|.|| |..|:.:|:  :.:........|:|...
  Fly   170 ----------DPS-----------------AELDLP-FRQLRRSRM--EFNLENLSMFIKSNVSR 204

  Fly  1304 QYQCSRPLFRTCWSYRTSNATSLSSLALQLRILWSCLRWDDMIAKPPSTDGKHQVTTDTEIVTLE 1368
            .....||.......|.|....:.|::.:.....:|..:    |.||   |||.|.|.:..||..|
  Fly   205 VDGLLRPKPEAYKQYVTDPGVNFSTIFIGKMPRYSPAK----IKKP---DGKKQSTLNKYIVAGE 262

  Fly  1369 LLKLRHSGRYGEKTSYLRRKVVIPLEMPKTVREVTSIRSGLRKRKRAESPQPTEPQITEEWVDED 1433
            ....:...:.......|..:    ||..|..:|...|.  |.|:| ||.    :.|:.|...:|.
  Fly   263 ATAAKSKAKAKSDAKSLAEE----LERVKREKEAKLIE--LEKQK-AEK----KAQLIERVENEC 316

  Fly  1434 KLELWEIKFMGEKQEKARLSAVTRSVASRQLEASGSNGSNTSTNGALGVAGRVQLAPK-LSED-- 1495
            .|.|         |:...|....:.|..|..:.                   |.|.|: |..|  
  Fly   317 NLLL---------QKTDDLERTDQKVLPRYRQI-------------------VTLLPEHLLGDAF 353

  Fly  1496 -VKEKMEQQLKLQRAVHQQRKLVATGEITRSVT--PVKGQVIGSRRVIVKNPDGTTRIIQQ---- 1553
             ::|.|.....|...:...|:.::..|:||::|  .:.|.:.....|::    ||...:|:    
  Fly   354 MMREFMHTYTGLLSGIEVFRQNLSFYEMTRALTAREIAGPLSDILLVLL----GTVFDLQKEEEE 414

  Fly  1554 --AVTQVSRTGGANTAAAAASPTVGGSTSTQSNPSTSTPHKVQIIRGPDGKVSVRGLNPGQQLVQ 1616
              |||.:.|      ||....|....:.:.:|:.........::     .::.:..|...:.|  
  Fly   415 ECAVTYLDR------AAQTQEPYWSMAQAAKSHLYAKRHFSFKV-----NELPLDALTLSEVL-- 466

  Fly  1617 MPDGKLHVLTTTTSSNSAGQGNKMKVPIKPA-STSSSPAISSAQTTTNPVTPVIKQIAVKH---- 1676
                :||:|.:....|.  :..:.:|..:.. |:...|.:               ::.::|    
  Fly   467 ----RLHLLGSGAFVNE--KAERWRVMYRNGYSSKEDPGL---------------ELRLEHSHIL 510

  Fly  1677 -VTKNSATQSIASSSRVALPLAQIKNKLLLAQQQQQSTSSSPATSSSPVQKIVSKVVNTSTSGQT 1740
             :.||.:...:           :.|:.:||.    :...|...|.|..:..|..::..|:.:.|.
  Fly   511 RILKNHSVYQL-----------KFKDIMLLI----RCLMSQIMTYSGTINLIEERMEQTAKARQD 560

  Fly  1741 LQQVFVQSGSKLVVGQNAQGQKVIISTSAAQQ------QGTSPVQQQQLVQSQPIQQSPQQISMT 1799
            |:        .||||:|.:...|.|:.....|      .|..|.:::.||:.             
  Fly   561 LR--------ALVVGENKRLAAVEINRKKLTQMHHLEVNGVEPEKREALVEK------------- 604

  Fly  1800 QVGNQPTQKVIQQIVNTSNVQQQIVVGGQRIILSPGQTIVTQRNVPQSQALQMVQQQIQ------ 1858
                  .:|.|.::...|:.|.                        :...|||::...|      
  Fly   605 ------LKKSIAELHAQSDQQH------------------------RKHELQMLKLHSQLFNFLV 639

  Fly  1859 ---TQQQQQQHHVVQPQQQFVVQSNQIVQSSPSAQTKLVKQLVVQQQSQQTIEEKTQITTTDSNE 1920
               ..:..::::|::......|:     .|..|..|.|          :|.|..|:||..     
  Fly   640 YLGMDRCYRKYYVLESMPGIFVE-----HSPDSLDTCL----------EQPITNKSQIEI----- 684

  Fly  1921 TGTQQVLVPNSTLAQQLAQGKLQVATVNGQQVIVKPLGNNQAQIVAHIKHQGDGNAHIVTSNSAT 1985
              .||..:|.:       :..|:|       .::|..|:::.:.....||.        ..|...
  Fly   685 --RQQSALPKN-------RKDLRV-------YLLKLYGDDEKKTKKKAKHS--------LENKEN 725

  Fly  1986 AVPQANPQTSPVKQQALPPQSPQQVVVQQQQIHQQSPTNFESGVTPITQQPVLTQAVQAPAQQQA 2050
            ...:.|....|:..::..|               ::||:||                        
  Fly   726 QEHRLNGSAEPMDVESDSP---------------EAPTHFE------------------------ 751

  Fly  2051 LSVEESLLQNQPPGTVIKCVTAQVLQTEHGPRIVLQGLVGNDFTAQQLQLVQTQVKQQLMKAQES 2115
                  ||...  |....|:   |..:.:|.|            .:...:.:.:...:|:||...
  Fly   752 ------LLMCS--GDKRSCI---VHDSRNGQR------------QRWAYIYKAEEIDELIKALNP 793

  Fly  2116 NGKLGVLGPTKIYLAVQPENAVQSQPPPLTPVHQSAAHQQVGGGVSIAYTRMMNSNYFVQEIEEE 2180
            ||       .:.|..:|..:.::|    |...|.......:   :|:....|........|.|..
  Fly   794 NG-------LREYELLQELSVLRS----LIEQHAKTCPVDL---LSLENETMRKKFMAAMESETN 844

  Fly  2181 EDYDDEIIVVCSPPNQIVPSPPREVFEGRILRSELPCRTNNNFEDQDNIEQHRLKYESE----DL 2241
            ..|.:                         ....||..|:.|...:.::....:::|::    ||
  Fly   845 RKYGE-------------------------ANFGLPNGTDLNEVMRLHLVDRIIQFENDIYTGDL 884

  Fly  2242 KRCSLQTNNIE-IDADTLATTYEA--------NSTIKDIAINNGDDQENSKCAETENSNITTN-- 2295
            .|  |:..::| ..:|.|...|:|        ...::|.|   |.|.|:.:..|.::..:...  
  Fly   885 GR--LKVKDMEKWRSDLLGGNYDAQCKLQWGPGGKLEDEA---GSDNESHETHEEDDGALLGKYA 944

  Fly  2296 -----------ESFAGTSSLLEG-SEHDEPTNLAGLDISETDLENKQNESFVVTRGYIQKSISNA 2348
                       .:.|.|..|.:. .|.|:.||...:.|:   :.|..:....|.:...::.:...
  Fly   945 RKPYRDPGMYLAASADTKPLPDSDDEEDQHTNAVSIPIA---VHNMASALLQVEQAIGKRFLKEP 1006

  Fly  2349 LKQGNLSPELEE-KLVCMQKQQENANSTNEWETCSRGSVN-----------EEALTPSRQTDDTE 2401
            .......|:.|. ||.|..:       .::||.....|.:           .:.:...|.|:.:.
  Fly  1007 YGMKKWDPKQEALKLACDSR-------LHQWEVSLMESTSFAQVFLHLNILHDCIQWRRSTNKSL 1064

  Fly  2402 WKIRTSLRRPNAMTTSSQFNR------ILKKNRSK-------NDEVAELGEQKQSQLERHKELLK 2453
            .|:......|..|....:.|.      :..|.||.       ||.|..|| ....|.|:.|:...
  Fly  1065 CKVCRRGSDPEKMLLCDECNAGTHMFCLKPKLRSVPPGNWYCNDCVKSLG-LSNGQNEKDKKQAT 1128

  Fly  2454 KNILRKRSLL--------------ERNLQSEIHEDVKTKVQRHVRPLSNASPDEQSENERSGEPN 2504
            |   :||..:              |:.......||.:.:.::|         ||..|::.|....
  Fly  1129 K---KKRKFIVEEEDDEATDEEEEEKKDDDMTDEDAEHENEKH---------DEDVEDDESVTST 1181

  Fly  2505 LDFKRTEVQNPRHGAGRP--KKLTRKKEKLYC------------ICRTPYDDT------------ 2543
            ....|...:..|....||  ::||.|:.:.:.            ...|..:||            
  Fly  1182 PSSSRVNGRILRRPRTRPTSRRLTSKEIEEHAQEDVDSGDVSDDASLTAGEDTIEDESDEEKVCQ 1246

  Fly  2544 -KFYVG----CDLCSNWFHGDCVSITEEASKKLSEFICIDCK-RARETQQLYCSCRQPYDESQFY 2602
             .||.|    |..|..:||.:||.:.....   ::|:|..|| ..:..::.:.:....:|     
  Fly  1247 KCFYDGGEIKCVQCRLFFHLECVHLKRPPR---TDFVCKTCKPMPQRPRRRHSNMNGDHD----- 1303

  Fly  2603 ICCDKCQDWFHGRCVGILQSEAEFIDEYVCPECQRKNDANAANMKKLTSNDVEE----------- 2656
                  :|....:......|....||:...|.....|:.|  |...:.:|:...           
  Fly  1304 ------RDEEEPKAKRPRNSLRLSIDKTARPSNGNNNNNN--NNSSVNNNNHRRSGRRTNEHMPL 1360

  Fly  2657 ----LKNLIKQMQLHKSAWPFMEPVDPKEAPDYYKVIKEPMDLKRMEIKLESNTYTKLSEFIGDM 2717
                |.:|::|:..||:||||:.||...|.|||:::||.||||.:::.||....|....|.:.|:
  Fly  1361 NSAALYDLLEQIMKHKAAWPFLRPVLTSEVPDYHQIIKTPMDLAKIKSKLNMGAYQLNEELLSDI 1425

  Fly  2718 TKIFDNCRYYNPKESSFYKCAEALESYFVQKIKNFR 2753
            ..:|.||..||.:.:..|.....||.:.:.:.::.:
  Fly  1426 QLVFRNCDLYNVEGNEIYDAGCQLERFVIDRCRDMQ 1461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(bx)NP_001261188.1 DDT 190..245 CDD:280886
WHIM1 288..337 CDD:292246
PHD1_BPTF 341..383 CDD:277034
BAH 361..>438 CDD:295389
TNG2 <2423..2638 CDD:227367 51/267 (19%)
PHD_SF 2533..2579 CDD:304600 14/74 (19%)
PHD2_3_BPTF 2589..2635 CDD:277035 6/45 (13%)
Bromo_gcn5_like 2653..2752 CDD:99941 34/113 (30%)
AcfNP_536734.2 WAC_Acf1_DNA_bd 26..125 CDD:287503 22/110 (20%)
DDT 346..411 CDD:214726 15/68 (22%)
WHIM1 505..554 CDD:292246 10/63 (16%)
WHIM2 637..666 CDD:292247 3/33 (9%)
WHIM3 775..813 CDD:292248 9/48 (19%)
PHD_RSF1 1064..1109 CDD:277018 8/44 (18%)
PHD 1244..1284 CDD:214584 11/42 (26%)
Bromo_Acf1_like 1349..1463 CDD:99936 34/113 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468244
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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