DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(bx) and Gcn5

DIOPT Version :9

Sequence 1:NP_001261188.1 Gene:E(bx) / 44811 FlyBaseID:FBgn0000541 Length:2761 Species:Drosophila melanogaster
Sequence 2:NP_648586.2 Gene:Gcn5 / 39431 FlyBaseID:FBgn0020388 Length:813 Species:Drosophila melanogaster


Alignment Length:961 Identity:190/961 - (19%)
Similarity:323/961 - (33%) Gaps:317/961 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1949 GQQVIVK--PL-GNNQAQIVAHIKHQGDGNAHIVTSNSATAVPQANPQTSPVKQQA--LPPQSPQ 2008
            |..:.:|  |: |||.....|..:.|....|....::.|....| ||........|  :|.:..:
  Fly     4 GPSITIKSQPIDGNNTGNAAAQQQQQAANGAATAGASGAAGSAQ-NPGHGGAASGAGSVPAEGTR 67

  Fly  2009 QVVVQQQQIHQQSPTNFESGVTPITQQPV---LTQAVQA----------PAQQQALSVEESLLQN 2060
            |..:|:.|..:|...|.     |:.|:..   :..|.|:          |.:.:...||.|..  
  Fly    68 QNSLQRIQQRKQKVFNL-----PVPQKLAKLSMYSACQSEGCRCTGWKTPQENRHRDVESSYC-- 125

  Fly  2061 QPPGTVIKC------------------VTAQVLQTEHGPRIVLQGL------VGNDFTAQQLQLV 2101
              |....:|                  :::..:....|..|.::.|      |.::.|.:..|.:
  Fly   126 --PEFNEECRNTSCRHSLRSHIAHLDNISSSSMNELLGAIIDMENLFMSMQRVEDEDTKKVYQYL 188

  Fly  2102 QTQVKQQLMKAQES--NGKLGVLGPTKIYLAVQPENAVQSQPPPLTPV--------------HQS 2150
            ...::|.::..|::  .|.||                   .||..||.              |.|
  Fly   189 FRLLRQCVLTRQQAVIRGPLG-------------------DPPFETPCITKAVLSLVFYKYNHLS 234

  Fly  2151 AAHQQVGGGVSIAYTRMMNSNYFVQ------EIEEEEDYDDEI-----IVVCSPP---NQIVPSP 2201
            ....|....|:..:...:|...|..      ::..|:..:.:|     :|.|..|   |.:....
  Fly   235 TPELQTMTEVAKTFLNFLNHYNFESPSTRRGDLTHEDASNYKINYTRWLVFCHVPAFCNSLRQCE 299

  Fly  2202 PREVFEGRILRSELPCRTNNNFEDQDNIEQHRLKYESEDLKRCSLQTNNIEIDADTLATTYEANS 2266
            ...||...:||:...|.:            .:||      |:|.                     
  Fly   300 TSLVFGRTLLRTVFQCMS------------QQLK------KKCI--------------------- 325

  Fly  2267 TIKDIAINNGDDQENSKCAETENSNITTNESFAGT--SSLLEGSEHDEPTNLAGLDISETDLENK 2329
                        .|..:..|.:.|.||....|..|  :.||   :.|.|.         .|...:
  Fly   326 ------------SERDRFPEDKRSIITLMPKFLETLRAELL---KDDSPI---------WDTSYR 366

  Fly  2330 QNESFVVTRGYIQKSISN-------ALKQGNLSPELEEKLVCMQKQQENANSTNEWETCSRGSVN 2387
            .:.|||:.:....:.::|       |...||....:.|.|....|::.....::|          
  Fly   367 PSNSFVIQQRKRNQEVANVPIGPSAASIGGNKRTSVGEPLHKRIKKEPTDRPSSE---------- 421

  Fly  2388 EEALTPSRQTDDTEWKIRTSLRRPNAMTTSSQFNR--ILKKNRSKNDEVAELGEQKQSQLERH-- 2448
                    ..||....:  .:|...:::.|...|:  ||.......||..:..|||:: :|.|  
  Fly   422 --------NLDDLPADV--VMRAMKSVSESKTTNKAEILFPVNVSRDENVKAEEQKRA-IEFHVV 475

  Fly  2449 -----KELLKKNILRKRSL----------LERNLQSEIHEDVKTKVQRHVRPLSNASPDEQSENE 2498
                 |.:.|:.:|....|          :.|...|::..|.|.|....::           ||:
  Fly   476 GNSLTKPVDKQTVLWLLGLQLVFAYQLPEMPREYISQLVFDTKHKTLALIK-----------ENQ 529

  Fly  2499 RSGE------PNLDFKRTEVQNPRHGAGRPKKLTRKKEKLYCICRTPYDDTKFYVGCDLCSN--- 2554
            ..|.      |:..|  ||:                   ::|.. |..:..|.| |..|.::   
  Fly   530 PIGGICFRPFPSQGF--TEI-------------------VFCAV-TMSEQVKGY-GTHLMNHLKD 571

  Fly  2555 ----------WFHGDCVSITEEASKKLSEFICIDCKRARETQQLYCSCRQPYDESQFYICCDKCQ 2609
                      ....||.:|.....:..|:    |.|.||   .:|....:.|| |...:.|:...
  Fly   572 YSIQRGIKHLLTFADCDAIGYFKKQGFSK----DIKLAR---PVYAGYIKEYD-SATLMHCELHP 628

  Fly  2610 DWFHGRCVGILQSEAEFIDEYVCPECQRKNDAN-------------------------------- 2642
            ...:.:.:.:::|::|.:.|.:   .||.|:..                                
  Fly   629 SIVNTQFIAVIRSQSEILKELI---AQRHNEVQKVRPGLTCFKEGLPVIPVESIPGLREIGWKPQ 690

  Fly  2643 ---AANMKKL-TSNDVEEL----KNLIKQMQLHKSAWPFMEPVDPKEAPDYYKVIKEPMDLKRME 2699
               |.:.:.| .|.|.|:|    .::::.::.|.:||||:.||...|.||||..||.|||||.|.
  Fly   691 NRPARSSRPLEESTDPEKLATSFASVLQSVRQHTTAWPFLRPVTAAEVPDYYDHIKYPMDLKTMG 755

  Fly  2700 IKLESNTYTKLSEFIGDMTKIFDNCRYYNPKESSFYKCAEALESYFVQKIK 2750
            .:|:...|.....|:.||.:||.|||:||..::.:|:||.:||.||..|::
  Fly   756 ERLKKGYYQTRRLFMADMARIFSNCRFYNSPDTEYYRCANSLERYFQTKMR 806

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(bx)NP_001261188.1 DDT 190..245 CDD:280886
WHIM1 288..337 CDD:292246
PHD1_BPTF 341..383 CDD:277034
BAH 361..>438 CDD:295389
TNG2 <2423..2638 CDD:227367 48/250 (19%)
PHD_SF 2533..2579 CDD:304600 10/58 (17%)
PHD2_3_BPTF 2589..2635 CDD:277035 8/45 (18%)
Bromo_gcn5_like 2653..2752 CDD:99941 43/102 (42%)
Gcn5NP_648586.2 PCAF_N 73..322 CDD:283997 47/294 (16%)
COG5076 451..807 CDD:227408 94/402 (23%)
Acetyltransf_1 526..598 CDD:278980 16/105 (15%)
Bromo_gcn5_like 708..808 CDD:99941 41/99 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468253
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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