DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(bx) and Dido1

DIOPT Version :9

Sequence 1:NP_001261188.1 Gene:E(bx) / 44811 FlyBaseID:FBgn0000541 Length:2761 Species:Drosophila melanogaster
Sequence 2:XP_006235867.1 Gene:Dido1 / 362286 RGDID:1311173 Length:2258 Species:Rattus norvegicus


Alignment Length:2394 Identity:426/2394 - (17%)
Similarity:736/2394 - (30%) Gaps:885/2394 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 EGKSQPSTPSASRGISPQSDE-----GSRSSHNNHTNRSRGSAAKR-GRG--------------- 80
            :.|...|...|.:.|.|.|.|     |.|          |.:.||| |.|               
  Rat     2 DDKGDLSNEEAPKAIKPTSKEFRKTWGFR----------RTTIAKREGAGDTEVDPSEQQPQQHN 56

  Fly    81 ---RKSAVQP----------NTSSYSGRKGYESEYHYGSDFGDSEEDKSDNEDDMLLTPSDDESL 132
               |:|..||          .|....|||.......      ||.|..|....|:          
  Rat    57 LSLRRSGRQPKRTERVEEFLTTVRRRGRKNVPVSLE------DSSEPTSSTVTDV---------- 105

  Fly   133 EVANESESEFSVCSFNQNGVGRPP------RPPSPEPVWLQEGRQYAALDLPDSSEDLFIANTHV 191
                |:.||.||.|.::...|..|      .|.|.|.|...:..:    |..||..|        
  Rat   106 ----ETASEGSVESSSEIRSGPAPGTLGKEHPSSSEKVKGGDEEE----DTSDSDSD-------- 154

  Fly   192 LRALSIYEVLRRFRHMVRLSPFRFEDLCAALACEEQSALLTEVHIMLLKAILREED---AQGTHF 253
              .|::.|:..|.|......|.            |:|  |..:...|.|. .||||   |.....
  Rat   155 --GLTLKELQNRLRRKREQEPV------------ERS--LRGIQNRLRKQ-RREEDPAEAGSVQI 202

  Fly   254 GPLDQKDTVNISLYLIDSITWPEVLRSYVESDKTFDRNVFHILSHTEYPYTGIDNRLEVLQFLSD 318
            |.::: ||....       ..||..:..|...:..||                :|:||       
  Rat   203 GSIEE-DTPRCK-------QEPEASQGPVSQSEKDDR----------------ENQLE------- 236

  Fly   319 QFLTSNSIRDVMLQEGPIH-----YDDH-----CRVCHRLGDLLCCETCPAVYHLECVDPPMNDV 373
            ...|..|..:...:.|...     ||.:     ||..|....::||:.|                
  Rat   237 GKATQGSKEESPREAGKPKPECEVYDPNALYCICRQPHNNRFMICCDRC---------------- 285

  Fly   374 PTEDWQCGLCRSHKVSGVVDCVLPQEKQGVLIRHDSLGVDRHGRKYWFIARRIFIEDQENFTCWY 438
              |:|..|           |||...|.:|.|:       :|:|               |::.|  
  Rat   286 --EEWFHG-----------DCVGISEARGRLL-------ERNG---------------EDYIC-- 313

  Fly   439 YSTTSKLKLLLSRLDAEELETRLHSQITERRDEIERQMKLTETLTNEHKHTKRSVIEIEQEAKNE 503
                                                              ...::::::.|..:.
  Rat   314 --------------------------------------------------PNCTILQVQDETSSS 328

  Fly   504 LLEKEVLDEDEKDGDAKSESQSIEGTKKQEECKMVTRQKSNQLTNGTLHFKLGMEQGFKNYVNQY 568
            ..:::         ||.......:||    :|..:          ||:..:.|.:||.|..:.: 
  Rat   329 AADEQ---------DAGCRPVGADGT----DCTSI----------GTVEQRSGEDQGIKGRIEK- 369

  Fly   569 STNPIALNKPQRNEERDKRRHLSHKFSLTTASDFKWIGITMGTTDNMITTLRQTLINFESNIAAS 633
            :.||....|                                       ..:.|.::  |:..|| 
  Rat   370 AANPSGKKK---------------------------------------LKIFQPVV--EAPGAA- 392

  Fly   634 FLNINWVVNKKIWNAAVMNARRPSEFAVVLLLFQASLKSVVFANVWHEQLGHTTLQRITSAEREE 698
                      |.......|..:|.              ||..:|....:....|::.::|.:.::
  Rat   393 ----------KCIGPGCSNVAQPD--------------SVYCSNDCILKHAAATMKILSSGKEQK 433

  Fly   699 RKKLEKREKRERDDEEERNRLAFNYIKYTLGLKHQVWKQKGEEYRVHGQWGWLWLSSSRRCGVRA 763
            .|..||                              .|.|.|::            |..:|.|:|
  Rat   434 PKPKEK------------------------------VKMKPEKF------------SLPKCSVQA 456

  Fly   764 RRAQPLTHNRVYVHYTMGEENDVNEIILVDPRTQRFMQQ--CESSNVDGQVCHY----------- 815
            .......|.|:   .:...||.|.::.|.. |::..:::  |||:.......:|           
  Rat   457 GIKISSVHKRL---ASEKRENPVKKVTLAS-RSETSVKEATCESTPSWASDHNYNAVKPEKPEKP 517

  Fly   816 ----------LPDQYKNVKVIEDVTEKIKGHIDVSKALNAPGRTYYSKVARKSRLDDLLDRRL-- 868
                      |....|:.|.:||.|.....   |.|....||    |.:.|::...:|:.::|  
  Rat   518 EKPTALSPTLLSKSMKDDKRVEDRTVAAAA---VPKKAVPPG----SVMGRQTSPRNLVPKKLPP 575

  Fly   869 --KLAEVEEQMASKIPSDMK------------------------PLLVSSQNNTANSKQTFLEKR 907
              .:|..:..: .|:||..|                        |::.:|:....::....:.::
  Rat   576 YPNMAGAKTAV-KKLPSGFKGTIPKRPWPSATLSGTSARQAGPTPVIAASKKLPGSAAVVGIARK 639

  Fly   908 LL-----RLTEVQAKGGPANVNLELVNSLAKQIQTVRLQFSQL---------------NRFAKVF 952
            .:     ..:.|..:.||.:......||..:  |.:|....::               |...|:.
  Rat   640 PMSANVPAASPVPGRLGPVSPAPSQPNSQIR--QNIRRSLKEILWKRVNDSDDLIMTENEVGKIA 702

  Fly   953 RCYTKECNTNSNAVSQITQN---TCYSPLCLQKARAKKELLL--LLRK----AHTAGNGSKETVA 1008
            ....||...    :.|:|.|   :.|..:.......|.:.|.  :||:    |.......:|.|:
  Rat   703 LHIEKEMFN----LFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVS 763

  Fly  1009 AILGA-VKKP--SILEQK---LTEGKRESTQ----------VAVDDSEE-----GKPAESEAPL- 1051
            ..|.. .:||  |::|.:   |.|.|:.||:          ..|.||||     ..|.:|.||| 
  Rat   764 KELSMWTEKPTKSVIESRTKLLNESKKNSTKPETIPDMEDSPPVSDSEEQESVRAAPEKSTAPLL 828

  Fly  1052 ----DLLQDW--EHARAHAVPFSDSLLTECILVDQECVTNTKIKQEVNASS---GCNTTPDSNTQ 1107
                .:|:|.  :| |||....:..:.|..:...::  .....||:::|||   ......||:..
  Rat   829 DVFSSMLKDTTSQH-RAHLFDLNCKICTGQVPSSED--EPAPKKQKLSASSKKEDLKARHDSSPP 890

  Fly  1108 DSDKIDYIESMDVCSNVEIESTEDSIVTGLNSGNAEDVDMTPGWRRKRNQKSKKSYIGTKDVLDQ 1172
            |:                :.||.|           |.:..||                     :.
  Rat   891 DA----------------VPSTAD-----------EGIAETP---------------------EN 907

  Fly  1173 TLDKDI----PLNKQNRRFPITA-----RPVKRECVKKYERETFENGNERVYSTSSPRGR----- 1223
            |.|.|:    .||::.:.||.:|     .|...:.:.    .:|.:|...|.:|.:..||     
  Rat   908 TCDPDLETVSSLNQERKGFPESAGDSHPEPSSLDGLS----SSFASGGSGVVTTVTVSGRDPRTA 968

  Fly  1224 -----VYLLNDAAKLYEQAVKTEDKSTITK--------------KPSYSRYPLISNFLTHKKKRS 1269
                 ....:.||.: :.:..:|.|..|.|              |||.|..|           |.
  Rat   969 LSGSCTVTASMAAHM-DNSQTSETKLEILKPALTSAVVPKSILAKPSSSPDP-----------RY 1021

  Fly  1270 LLVLPRFEL-LKLARLGGKSSTNGFHHAAKNNTIWQ---------------YQCSRPLFRTCWSY 1318
            |.|.|.... :..:|...:..|..|  .::.:|||:               |..|     .|..|
  Rat  1022 LSVPPSPNTSISESRSPPEGDTTLF--LSRLSTIWKGFINMQSVAKFVTKAYPVS-----GCLDY 1079

  Fly  1319 RTSNATSLSSLALQL--RILWSCLRWDDMIAKPPSTDGK-------HQVTTDTEIVTLELLKLRH 1374
            .:.:......:..::  :.:|      |.:.|..|:..|       |..|.:.|:..:.|.....
  Rat  1080 LSEDLPDTIHIGGRIAPKTVW------DYVGKLKSSVSKELCLIRFHPATEEEEVAYISLYSYFS 1138

  Fly  1375 S-GRYG---EKTSYLRRKVVIPLEMPKTVREVTSIRSGLRKRKRAESPQPTEPQITEEWVDEDKL 1435
            | ||:|   ....:::...:|||.                    |:.|.|:            ||
  Rat  1139 SRGRFGVVANNNRHVKDLYLIPLS--------------------AKDPVPS------------KL 1171

  Fly  1436 ELWEIKFMGEKQEKARLSAVTRSVASRQLEASGSNGSNTSTNGALGVAGRVQLAPKLSEDVKEKM 1500
                :.|.|...|..|.:.:...|..::::...|.|....|:         :..|:|.:   |:.
  Rat  1172 ----LPFEGPGLESPRPNIILGLVICQKVKRPSSAGELDKTD---------EKRPRLQQ---EET 1220

  Fly  1501 EQQL--KLQRAVHQQRK----LVATGEITRSVTPVKGQVIGSRRVIVKNPDGTTRIIQQAVTQVS 1559
            |..:  |:..|:..::|    .|.:.:.|.|.|...|           :|.....:.:..|.::.
  Rat  1221 ETSVYPKVTAALPSEKKPPKYSVHSADTTASSTTPPG-----------SPPPPPPLPEPPVLKIL 1274

  Fly  1560 RTGGANTAAAAASPTVGGSTSTQSNP------STSTP--HKVQIIRG------PDGKVSVRGLNP 1610
            .:....:.:...:||.....:|.::|      .|::|  |.:|.:.|      |.||.||     
  Rat  1275 SSLKPGSTSTVTAPTTSAVITTTASPVTAATSKTASPLEHILQTLFGKKKSFEPSGKESV----- 1334

  Fly  1611 GQQLVQMPDGKLHVLTTTTSSNSAGQGNKMKVPIKPASTSSSPAISSAQTTTNPVTPVIKQIAVK 1675
            |..|....|.|           :.|:......|:                    :.|:::|..  
  Rat  1335 GSTLAPHHDSK-----------AKGEDTMSAAPL--------------------LDPIVQQFG-- 1366

  Fly  1676 HVTKNSATQSIASSSRVALPLAQIK-----NKLLLAQQQQQSTSSSPATSSSPVQKIVSKVVNTS 1735
            ..:|:.|.:......|...|..:..     :.||....:.....|.|.|:..      .:|....
  Rat  1367 QFSKDKALEEEEEDDRPYDPEEEYNPDRAFHTLLAEPGRPHDVPSVPETAER------EEVAYDP 1425

  Fly  1736 TSGQTLQQVFV---QSGSKLVVGQNAQGQKVIISTSAAQQQGTSPVQQQQLVQ--SQPIQQSPQQ 1795
            .....|::..|   ...:::.|..::..:....||.|:   ..|.|:||::::  ::.|::..:|
  Rat  1426 EDETILEEAKVTIDDLPNRMCVKVSSTERPADFSTDAS---SASLVEQQKMLEELNKQIEEQKRQ 1487

  Fly  1796 ISMTQVGNQPTQKVIQQIVNTSNVQQQIVVGGQRIILSPGQTIVTQRNVPQSQALQMVQQQIQTQ 1860
            :       :..::.::        ||:..||......|....:::.   |...:|.      :|:
  Rat  1488 L-------EEQEEALR--------QQRAAVGVSMAHFSVSDALMSP---PPKSSLG------KTE 1528

  Fly  1861 QQQQQHHVVQPQQQFVVQSNQIVQSSPSAQTKLVKQLVVQQQSQQTIEEKTQITTTDSNETGTQQ 1925
            ...|:...:.|.|. .:.:|..:.|..|...:..::|..:....:::......:|     :|.|.
  Rat  1529 LFSQEQQALDPSQG-SLSTNHSLDSRQSRDPRQARRLAAENTENESLPRAPTGST-----SGPQG 1587

  Fly  1926 VLVPNSTLA-QQLAQG-------KLQVAT--VNGQQVIVKPLGNNQAQIVAHIKHQGD---GNAH 1977
            .|....|.| ..:|||       |..:|:  ..|:..:::|  .:..|...|..:...   ..:|
  Rat  1588 TLPARETPAGAAVAQGPGLAAEAKESMASPWAPGENTVLRP--EHDIQKCEHSSNPVSLPLDTSH 1650

  Fly  1978 IVTSNSATAVPQANPQ-----TSPVKQQALPPQSPQQVVVQQQQIHQQSPTNFESGVTPITQQPV 2037
            :.|:...||.| |.|:     |.|  ....||..|.|...|......:.|.   ||.|.::|:..
  Rat  1651 LPTAGDGTARP-APPRRVLLPTPP--STTFPPSFPLQPEAQNFSSGGREPF---SGPTFLSQETS 1709

  Fly  2038 L-TQAVQAPAQQQALSVEESLL-------QNQP-PGTVIKCVTAQVLQTEHGPRIVLQGLVGNDF 2093
            | :...:.|...|:....:|.:       :.|| ||                     :|......
  Rat  1710 LGSSQYEDPRGAQSAGRSDSPVADMEDSREPQPRPG---------------------EGATSFPS 1753

  Fly  2094 TAQQLQLVQTQVKQQLMKAQESNGKLGVLGPTKIYLAVQPENAVQSQPPPLTPV 2147
            .||:....|.|...|...|..:.|..|..||              |.|.|..||
  Rat  1754 PAQRGGGPQPQFPGQREPAPRTFGMSGHHGP--------------SFPGPRGPV 1793

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(bx)NP_001261188.1 DDT 190..245 CDD:280886 10/54 (19%)
WHIM1 288..337 CDD:292246 8/48 (17%)
PHD1_BPTF 341..383 CDD:277034 9/46 (20%)
BAH 361..>438 CDD:295389 13/76 (17%)
TNG2 <2423..2638 CDD:227367
PHD_SF 2533..2579 CDD:304600
PHD2_3_BPTF 2589..2635 CDD:277035
Bromo_gcn5_like 2653..2752 CDD:99941
Dido1XP_006235867.1 TNG2 <157..299 CDD:227367 42/216 (19%)
PHD_DIDO1_like 263..316 CDD:277109 19/155 (12%)
TFS2M 671..772 CDD:128786 18/104 (17%)
SPOC 1046..1194 CDD:400205 34/196 (17%)
SWIRM-assoc_1 <1465..1502 CDD:406808 8/51 (16%)
PHA03247 <1564..2085 CDD:223021 59/278 (21%)
SF-CC1 2144..>2182 CDD:273721
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1632
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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