DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(bx) and Fbxl19

DIOPT Version :9

Sequence 1:NP_001261188.1 Gene:E(bx) / 44811 FlyBaseID:FBgn0000541 Length:2761 Species:Drosophila melanogaster
Sequence 2:XP_036008913.1 Gene:Fbxl19 / 233902 MGIID:3039600 Length:696 Species:Mus musculus


Alignment Length:429 Identity:85/429 - (19%)
Similarity:131/429 - (30%) Gaps:144/429 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PPKTPNERASGRFN--YQLLKKPKYLSEGKSQPSTPSASRGISPQSDEGSRSSHNNHTNRSRGSA 74
            |..:|......||.  .|||::....|...|...:.|.|.|.|...||....:.|........|.
Mouse   300 PSPSPQREKLERFKRMCQLLERVPDTSSSSSDSDSDSDSSGTSLSEDEAPGEARNGRRPARGSSG 364

  Fly    75 AKRGRGRKSAVQPNTSSYSGRKGYESEYHYGSDFGDSEEDKSDNEDDMLLTPSDDESLEVANESE 139
            .|..||.:.|::|.|.      |....:..|.                 ..|.....||      
Mouse   365 EKENRGGRRAIRPGTG------GPLLSWPLGP-----------------APPPRPPQLE------ 400

  Fly   140 SEFSVCSFNQNGVGRPPRPPSPEPVWLQEGRQYAALDLPDSSEDLFIANTHVLRALSIYEVLRRF 204
                     ::.|..|||.|.|:.:.|..|..:   .||.::                  .||.|
Mouse   401 ---------RHVVRPPPRSPEPDTLPLAAGSDH---PLPRAA------------------WLRVF 435

  Fly   205 RHMVRLSPFRFEDLCAAL-ACEEQSALLTEVHI---------------MLLKAILREEDAQGTHF 253
            :|   |.|   .:||..: .|...|....:..:               ||...:.|:..|....:
Mouse   436 QH---LGP---RELCVCMRVCRTWSRWCYDKRLWPRMDLSRRKSLTPPMLSGVVRRQPRALDLSW 494

  Fly   254 GPLDQKDTV-------NISLYLIDSITWPEV----------LR----SYVESDKTFDRNVFHIL- 296
            ..:.:|..:       .:...::...:|..|          ||    .::|..|  |..:..:| 
Mouse   495 TGVSKKQLMWLLNRLQGLQELVLSGCSWLSVSALGSAPLPALRLLDLRWIEDVK--DSQLRELLL 557

  Fly   297 --SHTEYPYTGIDNRLE-VLQF-LSDQFLTSNSIRDVMLQEGP----------IHYDD------- 340
              ..|:...|....||: |.:. |:...||..|:| ::|:..|          .|..|       
Mouse   558 PPPDTKPGQTESRGRLQGVAELRLAGLELTDASLR-LLLRHAPQLSALDLSHCAHVGDPSVHLLT 621

  Fly   341 -----------HCRV--CHRLGD--LLCCETCPAVYHLE 364
                       |..:  ||||.|  |.....||.:..|:
Mouse   622 APTSPLRETLVHLNLAGCHRLTDHCLPLFRRCPRLRRLD 660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(bx)NP_001261188.1 DDT 190..245 CDD:280886 12/70 (17%)
WHIM1 288..337 CDD:292246 14/63 (22%)
PHD1_BPTF 341..383 CDD:277034 10/28 (36%)
BAH 361..>438 CDD:295389 1/4 (25%)
TNG2 <2423..2638 CDD:227367
PHD_SF 2533..2579 CDD:304600
PHD2_3_BPTF 2589..2635 CDD:277035
Bromo_gcn5_like 2653..2752 CDD:99941
Fbxl19XP_036008913.1 zf-CXXC <52..79 CDD:366873
PHD_FXL19 89..150 CDD:277115
F-box-like 426..467 CDD:403981 12/64 (19%)
AMN1 468..667 CDD:187754 37/196 (19%)
leucine-rich repeat 488..511 CDD:275381 2/22 (9%)
leucine-rich repeat 512..535 CDD:275381 2/22 (9%)
leucine-rich repeat 573..600 CDD:275381 8/27 (30%)
leucine-rich repeat 601..627 CDD:275381 2/25 (8%)
leucine-rich repeat 631..655 CDD:275381 8/23 (35%)
leucine-rich repeat 656..680 CDD:275381 1/5 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1632
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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