DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(bx) and npp-2

DIOPT Version :9

Sequence 1:NP_001261188.1 Gene:E(bx) / 44811 FlyBaseID:FBgn0000541 Length:2761 Species:Drosophila melanogaster
Sequence 2:NP_492256.1 Gene:npp-2 / 172611 WormBaseID:WBGene00003788 Length:598 Species:Caenorhabditis elegans


Alignment Length:363 Identity:72/363 - (19%)
Similarity:123/363 - (33%) Gaps:140/363 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly  2227 DNIEQHRLKYESEDLKRCSLQTNNI------------EIDADTLATTYEA-NSTIKDIAINNGDD 2278
            :.:.|:|....:.:|:|..::..::            .:|..|..|...| .|.:.:.|:::   
 Worm    37 EKVSQNRQILATPNLRRLVIEMYSVFDKCQKGSSPDAPLDTPTCCTFSRAYRSVLYNAAVSH--- 98

  Fly  2279 QENSKCAETENSNITTNESFA------------GTSSLLEGSEHDEPTNLAGLDISETDLENKQN 2331
                     .:|:..|:  ||            |.||:.                  .||.:..|
 Worm    99 ---------SSSDFMTD--FALWSLYEKLWFGRGDSSIC------------------ADLISWAN 134

  Fly  2332 ESFVVTRGYIQKSISNALKQGNLSPELEEKLV-----------CMQKQQ---------------- 2369
            :||..:||.::.:: ..|..|...||...|.|           |::..:                
 Worm   135 QSFTFSRGAMESAV-EYLHPGKTIPEEYWKGVAVSLLSCNFSDCVELLELHGGGSECDAFIEALT 198

  Fly  2370 ----EN------ANSTNEWETCSRGSVNEEALTPSRQTDDTEWKIRTSLRRPNAMTTSSQFNRI- 2423
                ||      ||:.|||:...|     |.||..:...:..:|..|.|.........|..:|| 
 Worm   199 FFNPENLVDEALANTVNEWKDIMR-----ENLTSGKYGSNENFKYLTKLLLGEERYLVSMASRIF 258

  Fly  2424 -----------LKKNR-SKNDEVAEL---------GEQKQSQLERHKE------LLKKNILRKRS 2461
                       |.||. :.:.|:.||         ||:::   |..||      |:.|:.:..:.
 Worm   259 DTWWHFLPFFVLVKNPFAGHVELIELADECRTLFVGEEEE---EGAKENDVFWCLISKDDINFQQ 320

  Fly  2462 LLERN------LQSEIHE---DVKTKVQRHVRPLSNAS 2490
            |:..|      |...||:   |.:.:|.|.:..|..||
 Worm   321 LIASNPWLAVHLVDLIHKSTLDPEFEVMRKMHMLDYAS 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(bx)NP_001261188.1 DDT 190..245 CDD:280886
WHIM1 288..337 CDD:292246
PHD1_BPTF 341..383 CDD:277034
BAH 361..>438 CDD:295389
TNG2 <2423..2638 CDD:227367 25/105 (24%)
PHD_SF 2533..2579 CDD:304600
PHD2_3_BPTF 2589..2635 CDD:277035
Bromo_gcn5_like 2653..2752 CDD:99941
npp-2NP_492256.1 Nucleopor_Nup85 35..559 CDD:284900 72/363 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1570
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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