DRSC/TRiP Functional Genomics Resources

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Protein Alignment MSR1 and teq

DIOPT Version :10

Sequence 1:NP_001350673.1 Gene:MSR1 / 4481 HGNCID:7376 Length:469 Species:Homo sapiens
Sequence 2:NP_648288.2 Gene:teq / 39048 FlyBaseID:FBgn0023479 Length:2792 Species:Drosophila melanogaster


Alignment Length:100 Identity:44/100 - (44%)
Similarity:64/100 - (64%) Gaps:1/100 - (1%)


- Green bases have known domain annotations that are detailed below.


Human   369 RLVGGSGPHEGRVEILHSGQWGTICDDRWEVRVGQVVCRSLGYPGVQAVHKAAHFGQGTGPIWLN 433
            ||.||...:|||:|:.|.|.||::|||.:.::..||.|.|:|:.|...:.|.. ||...|||||:
  Fly  2382 RLEGGRNSNEGRLEVKHHGVWGSVCDDDFNLKSAQVACNSMGFFGPAKIEKNI-FGNSNGPIWLD 2445

Human   434 EVFCFGRESSIEECKIRQWGTRACSHSEDAGVTCT 468
            :|.|||.|:||::|....||...|:|:||..:.|:
  Fly  2446 QVMCFGNETSIDQCNHWNWGEHNCNHTEDVALHCS 2480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MSR1NP_001350673.1 Macscav_rec 139..187 CDD:460956
gly_rich_SclB 218..>376 CDD:468478 4/6 (67%)
Collagen 298..352 CDD:460189
SR 368..468 CDD:214555 43/98 (44%)
teqNP_648288.2 CBM_14 65..115 CDD:426342
ChtBD2 136..184 CDD:214696
ChtBD2 215..261 CDD:214696
ChtBD2 284..327 CDD:214696
ChtBD2 521..567 CDD:214696
ChtBD2 608..654 CDD:214696
ChtBD2 709..752 CDD:214696
CBM_14 782..829 CDD:426342
ChtBD2 864..909 CDD:214696
CBM_14 942..993 CDD:426342
Med15 1029..>1325 CDD:312941
ChtBD2 1324..1369 CDD:214696
ChtBD2 1474..1518 CDD:214696
PHA03247 <1587..1906 CDD:223021
LDLa 2193..2222 CDD:238060
SR 2229..2331 CDD:214555
LDLa 2337..2370 CDD:197566
SR 2382..2480 CDD:214555 43/98 (44%)
Tryp_SPc 2547..2784 CDD:238113
Blue background indicates that the domain is not in the aligned region.

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