DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bsk and strd-1

DIOPT Version :9

Sequence 1:NP_001162930.1 Gene:bsk / 44801 FlyBaseID:FBgn0000229 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001022902.1 Gene:strd-1 / 176526 WormBaseID:WBGene00013132 Length:388 Species:Caenorhabditis elegans


Alignment Length:332 Identity:76/332 - (22%)
Similarity:139/332 - (41%) Gaps:45/332 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 VAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQRNLEEFQDVYLVMELMDANLC 114
            |||||.:  ..:|.......:|...::|::|.|||.|...|..:|::.:......:..|.|. :.
 Worm    79 VAIKKFA--IDDVDDYAAIAKESSNLRLMHHPNIIELCECFVYERSIYQITPAMNLGSLFDI-VF 140

  Fly   115 QVIQMDLDHDRMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKADCTLKILDF----GLARTAG 175
            :.::..::....:.:..|:|..:.:||....|||||||.:|::.:...:|:..|    .|.....
 Worm   141 EYMKWGINEKSAAAITRQLLDALSYLHQRRYIHRDLKPKHILIDSSGNVKLSGFRFMIELNHHLD 205

  Fly   176 TTFMMTPYVVTR-YYRAPEVILG--MGYTENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWN-KII 236
            ..|....::..: ||.||||:..  .|||...||:.:|..:.|.|.|.:.|...:.::..: |:.
 Worm   206 CVFEFDAHLQNQLYYLAPEVLAQNIHGYTSKSDIYMLGISICEAINGVMPFGELEPLEMLHRKLN 270

  Fly   237 EQLGTPSPSFMQRLQPTVRNYVENRPRYTGYSFDRLFPDGLFPNDNNQNSRRKASDARNLLSKML 301
            .|:..|......:....:...:.:||:                   ...:||.:.:....::..|
 Worm   271 GQVPRPVDMISLKDDQKMGLDISHRPQ-------------------EHLTRRFSKEMHEFIANCL 316

  Fly   302 VIDPEQRISVDEALKHEYINVWYDAE------EVDAPAP-----EPYDHSVDEREHTVEQWKELI 355
            ..||:||.|..: ||.   :.|..::      .||....     ..:|.|:.|:|..:....:..
 Worm   317 DYDPQQRGSASD-LKS---SAWLGSKIHKNLGPVDVRQELNLDYAHFDLSLWEQEPLIPMEPDQK 377

  Fly   356 YEEVMDY 362
            ||.|.||
 Worm   378 YEIVFDY 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bskNP_001162930.1 STKc_JNK 23..359 CDD:270840 73/327 (22%)
strd-1NP_001022902.1 PKc_like 59..329 CDD:304357 62/272 (23%)
S_TKc 64..335 CDD:214567 64/281 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.