DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment abo and det1

DIOPT Version :9

Sequence 1:NP_524784.1 Gene:abo / 44793 FlyBaseID:FBgn0000018 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_955964.1 Gene:det1 / 324089 ZFINID:ZDB-GENE-030131-2809 Length:563 Species:Danio rerio


Alignment Length:572 Identity:157/572 - (27%)
Similarity:279/572 - (48%) Gaps:82/572 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KRLQSQNLVHLLQNRESGYTNVGQQPGRMPLLAYERLFYKCITPCLTIDSITIPPIYLRKFTPDG 69
            :|:|:||:||.|:.|......||....|:      |.|::.:.|..|:.::..||.:||||:|||
Zfish    23 RRIQNQNVVHRLERRRICSGPVGAHWYRV------RCFHQNLFPNFTVVNVEKPPCFLRKFSPDG 81

  Fly    70 RKLLAFSQDQRSLLIYSYGGSSCAAVGELIRQADVGSGECFSS----QDTILKSRIFERLFPTKE 130
            |..:|||.||.||.||.|.|  |.|..:|::..:   ||..::    :...::..:|||.|....
Zfish    82 RCFIAFSSDQTSLEIYEYQG--CQAAEDLLQGQE---GETLANGNDQRSFNIRGHLFERFFSLLH 141

  Fly   131 TLNLC-QGDFGLYYLHREFSVFLEEGRYAMLAAMTVVRGALPVDDYVRYPDLFDKVDAFS----- 189
            ..|:. .|:    :|:||.|:|.::.||.::.:...    ||.:.:..:.:::...::.:     
Zfish   142 VTNVASNGE----HLNRECSLFTDDCRYVIVGSAAY----LPEEPHPHFFEVYRNNESVTPNPRS 198

  Fly   190 ----YVFFLVDLKLGVVTDRLILPNDSIVIAHNHGISVFGSTVMMMSRLHQCVYVYWV-NDGKFH 249
                |...::||..|.:.|......|.|:::||.|:.::.:.:.::|...|.::|:.| ::|.|.
Zfish   199 PLEDYSLHIIDLHTGRLCDTRTFKCDKIILSHNQGLYLYRNILAVLSVQQQTIHVFQVTSEGTFL 263

  Fly   250 QQETIGPRPRDFIEKATTDFDNLDATTVL------------------PITHIKQRVLSFLYRKIN 296
            ...|||        :...:.|.|..:.|.                  .|..:|.|:|.:|:|:. 
Zfish   264 DVRTIG--------RFCYEDDLLTLSAVYSEAQAEGQPGFSRLYKEKTINSLKHRLLVYLWRRA- 319

  Fly   297 DKSGNPTESQKSFYKNFEYIEHMIMERMHLVNNELLMLRYEERPNGTDTMPM-ATSPRR--LYVF 358
            ::.|:.| :::.|::.|:.:..:.|.:|.|::...|.::|    ...|.:.: .|.|.:  .:|.
Zfish   320 EQDGSAT-AKRRFFQFFDQLRQLRMWKMQLLDEHHLFIKY----TSEDVVTLRVTDPSQPSFFVV 379

  Fly   359 YTITGEEVVGVYPEYSVNLLQILLQFNDYMSN----DRSLQFGDAPSLPMHFFLRHT---FADSN 416
            |.:...||:.|:...|..||::...|.|...|    ..::||..:.|  .:.|.|..   |.|:.
Zfish   380 YNMLSTEVIAVFENTSDKLLELFENFCDLFRNATLHSEAVQFPCSAS--SNNFARQVQRRFKDTI 442

  Fly   417 ESVSVDRHT--ALRFNPSVPLSSQSLSSSPYLKFNEFRYDSRYVSPLEQPHRCCNDPIVFLDRAT 479
            .:.....||  ..|....:|:|:||.||||||..:.|.||.::||.:|:|..|.:.||.|..|.:
Zfish   443 VNAKYGGHTEAVRRLLGQLPISAQSYSSSPYLDLSLFSYDDKWVSVMERPKTCGDHPIRFYARDS 507

  Fly   480 DSIKFRLHA-TARRHLNPLAPRELCAFIWHPFDPLVLSIQKCMNSYVYHVHL 530
            ..:||::.| ...|.:|... |.|.||.:|||:|..:|:|:....||.:.|:
Zfish   508 GLLKFKIQAGLLGRPINHTV-RRLVAFTFHPFEPFAISVQRTNAEYVVNFHM 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aboNP_524784.1 Det1 146..531 CDD:286780 109/426 (26%)
det1NP_955964.1 Det1 154..559 CDD:286780 109/426 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592677
Domainoid 1 1.000 131 1.000 Domainoid score I5141
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 194 1.000 Inparanoid score I3824
OMA 1 1.010 - - QHG60266
OrthoDB 1 1.010 - - D272605at33208
OrthoFinder 1 1.000 - - FOG0007100
OrthoInspector 1 1.000 - - oto41308
orthoMCL 1 0.900 - - OOG6_105528
Panther 1 1.100 - - LDO PTHR13374
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5501
SonicParanoid 1 1.000 - - X5186
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.940

Return to query results.
Submit another query.