DRSC/TRiP Functional Genomics Resources

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Protein Alignment eEF1gamma and tm2d2

DIOPT Version :9

Sequence 1:NP_001189308.1 Gene:eEF1gamma / 44791 FlyBaseID:FBgn0029176 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_001011324.1 Gene:tm2d2 / 496785 XenbaseID:XB-GENE-964283 Length:198 Species:Xenopus tropicalis


Alignment Length:160 Identity:28/160 - (17%)
Similarity:50/160 - (31%) Gaps:54/160 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   263 DEALAAEPKSKDPF------DALPKGTFNFDDFKRVYSNEDEAKSIPYFFDKFDAENYSIWFGEY 321
            |..|:|.|:.:||.      ..||:.....||......|....:.:.|...||..:.|    |:.
 Frog    38 DLNLSAAPEPRDPLGPLVLCSYLPEEFVECDDPVDHMGNGTAQQELRYGCKKFGGQAY----GDV 98

  Fly   322 KYNEELSKVF---------------MSCNLITGMFQRLDKMRKAAFASVCLF------------- 358
            ::.:.:.:..               ..|...||.:          |.:..|:             
 Frog    99 EHTQVMCRALDGIECDGPRSFLRGNKPCIKYTGHY----------FITTLLYSFFLGCFGVDRFC 153

  Fly   359 -GEDGNS-----TISGIWVWRGQDLAFTLS 382
             |..|.:     |:.|:.:|...||...::
 Frog   154 LGHTGTAVGKLLTLGGLGIWWFVDLILLIT 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEF1gammaNP_001189308.1 GST_N_EF1Bgamma 4..79 CDD:239342
GstA 5..187 CDD:223698
GST_C_EF1Bgamma_like 90..209 CDD:198290
EF1G 271..376 CDD:279041 22/144 (15%)
tm2d2NP_001011324.1 TM2 130..179 CDD:377473 10/58 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0625
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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