DRSC/TRiP Functional Genomics Resources

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Protein Alignment eEF1gamma and SPAC29A4.02c

DIOPT Version :9

Sequence 1:NP_001189308.1 Gene:eEF1gamma / 44791 FlyBaseID:FBgn0029176 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_594880.1 Gene:SPAC29A4.02c / 2542298 PomBaseID:SPAC29A4.02c Length:409 Species:Schizosaccharomyces pombe


Alignment Length:448 Identity:148/448 - (33%)
Similarity:232/448 - (51%) Gaps:56/448 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVKGTLYTYPENFRAYKALIAAQYSGAQVKVAD----NFKFGETNKSAEFLKKFPGGKVPAFETA 61
            |..||:|....:.|....:..|..:|.:|:..|    ||       .|:...|||..|:|.|...
pombe     1 MSVGTVYGKIGSPRVLFCVSVAAVAGVEVEHVDVQPHNF-------PADLAAKFPLQKMPVFVGK 58

  Fly    62 EGQYLSESNAIAYLLAN---EQLRGGKCPFVQAQVQQWISFADNEIVPASCAWVFPLLGILPQQK 123
            :|..|||:.|||:.||:   .:...|.....:|:|.|:.||.::|:..|....:.|.:...|..:
pombe    59 DGFPLSETLAIAFYLASLNKTRALNGTTAEEKAKVLQYCSFTNSELPGAFRPIIAPRVFGAPYDE 123

  Fly   124 NSTAKQEAEA----VLQQLNQKLQDATFLAGERITLADIVVFSSLLHLYEYVLEPSVRSAFGNVN 184
            .  |.:|||.    :..:.:::|...|:|.|.|:|||||.....|.....|||..|..:.:.::.
pombe   124 Q--AAKEAETAIALIFARFDEELASKTYLVGSRLTLADIFFTCFLKFGATYVLTKSYLAKYTHIY 186

  Fly   185 RWFVTILNQKQVQAVVKDYKLCEKALVFDPKKYAEFQAKTGAAKPQQQAQQQKQEKKPKEKKEAP 249
            |::.||.:|.::.|:.:..|..::.|..       .:|:...|.|.::|:::|.||    ||.||
pombe   187 RYYQTIYHQAKLDAITEPLKFIDQPLPI-------IKAENKEAAPAKKAEKKKDEK----KKNAP 240

  Fly   250 KKAAEPAEELDAADEALAAEPKSKDPFDALPKGTFNFDDFKRVYSNED-EAKSIPYFFDKFDAEN 313
            |..|          ||.|..|  |.|..:.|.|:|:.:::||||||:| .:.::|:||:.||.||
pombe   241 KPQA----------EAPAKPP--KHPLASAPNGSFDIEEYKRVYSNQDTRSGALPWFFEHFDPEN 293

  Fly   314 YSIWFGEYKYNEELSK-VFMSCNLITGMFQRLDKMRKAAFASVCLFGEDGNSTISGIWVWRGQDL 377
            ||:|..:|.|.|:|.: |||:.|||.|.||||:..||..|....:.||:|::||:|.:|.:|.|.
pombe   294 YSVWKVDYSYPEDLKQPVFMTNNLIGGFFQRLEASRKYIFGCCVVIGENGDNTITGAFVIKGHDY 358

  Fly   378 --AFTLSPDWQIDYEVYDWKKLDAKSEETKKLVTQYFSWSGTDK--DGRKFNQGKIFK 431
              ||.::|||    ..|.:.|||....|.|..:...::|   ||  :||:...||:.|
pombe   359 VPAFDVAPDW----GSYTFTKLDINKPEDKAFIEDAWAW---DKPIEGREVADGKVCK 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEF1gammaNP_001189308.1 GST_N_EF1Bgamma 4..79 CDD:239342 26/81 (32%)
GstA 5..187 CDD:223698 55/192 (29%)
GST_C_EF1Bgamma_like 90..209 CDD:198290 34/122 (28%)
EF1G 271..376 CDD:279041 48/106 (45%)
SPAC29A4.02cNP_594880.1 GST_N_EF1Bgamma 4..76 CDD:239342 26/78 (33%)
GstA 5..192 CDD:223698 55/195 (28%)
GST_C_EF1Bgamma_like 89..211 CDD:198290 34/123 (28%)
EF1G 251..357 CDD:279041 49/107 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 103 1.000 Domainoid score I1746
eggNOG 1 0.900 - - E1_COG0625
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 196 1.000 Inparanoid score I1020
OMA 1 1.010 - - QHG54211
OrthoFinder 1 1.000 - - FOG0003242
OrthoInspector 1 1.000 - - otm47299
orthoMCL 1 0.900 - - OOG6_101050
Panther 1 1.100 - - LDO PTHR43986
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R366
SonicParanoid 1 1.000 - - X2193
TreeFam 1 0.960 - -
1211.950

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