DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eEF1gamma and GstD11

DIOPT Version :10

Sequence 1:NP_652000.1 Gene:eEF1gamma / 44791 FlyBaseID:FBgn0029176 Length:431 Species:Drosophila melanogaster
Sequence 2:XP_562676.3 Gene:GstD11 / 1273987 VectorBaseID:AGAMI1_010233 Length:218 Species:Anopheles gambiae


Alignment Length:194 Identity:47/194 - (24%)
Similarity:77/194 - (39%) Gaps:27/194 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LYTYPENFRAYKALIAAQYSGAQVKV-ADNFKFGETNKSAEFLKKFPGGKVPAFETAEGQYLSES 69
            ||..|.:......|:.|:..|.:::: |.|...||..| .:|::..|...:|..:. .|..|.||
Mosquito     5 LYYLPPSPPCRSVLLLAKMIGVELELKALNVMEGEQLK-PDFVELNPQHCIPTLDD-HGLVLWES 67

  Fly    70 NAI-AYLLA----NEQL-----RGGKCPFVQAQVQQWISFADNEIVPASCAWVFPLLGILPQQKN 124
            ..| |||::    :|.|     |.      :|.|.|.:.|....:......:.||.:. |....:
Mosquito    68 RVILAYLVSAYGKDENLYPKDFRS------RAIVDQRLHFDLGTLYQRVVDYYFPTIQ-LGAHLD 125

  Fly   125 STAKQEAEAVLQQLNQKLQDATFLAGERITLADIV--VFSSLLHLYEYVLEPSVRSAFGNVNRW 186
            .|.|.:....|......|:...:.|....|:|||.  |..|.:..:::.|.|     :..|..|
Mosquito   126 QTKKAKLAEALGWFEAMLKQYQWSAANHFTIADIALCVTVSQIEAFQFDLHP-----YPRVRAW 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEF1gammaNP_652000.1 GST_N_EF1Bgamma 4..79 CDD:239342 22/78 (28%)
GST_C_EF1Bgamma_like 90..209 CDD:198290 22/99 (22%)
EF1G 273..376 CDD:459888
GstD11XP_562676.3 GST_N_Delta_Epsilon 3..76 CDD:239343 22/72 (31%)
GST_C_Delta_Epsilon 92..209 CDD:198287 22/99 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.